Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03186 | Sorghum | cytosol | 93.44 | 38.64 |
| Os01t0588400-01 | Rice | plasma membrane | 80.33 | 31.51 |
| Zm00001d005648_P002 | Maize | cytosol, mitochondrion, plasma membrane | 68.03 | 29.23 |
| Zm00001d050265_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 66.39 | 27.27 |
| Zm00001d039173_P002 | Maize | plastid | 65.57 | 23.46 |
| Zm00001d036073_P002 | Maize | plasma membrane | 52.46 | 22.22 |
| Zm00001d003131_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d003689_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d028839_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d044323_P001 | EnsemblPlants:Zm00001d044323_T001 | EnsemblPlantsGene:Zm00001d044323 | ncoils:Coil | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF4 |
| ProteinID:ONM40882.1 | SEG:seg | UniParc:UPI0002216061 | UniProt:A0A1D6NKX6 | MapMan:35.1 | : |
Description
Hypersensitive-induced response protein 1
Coordinates
chr3:-:225165493..225165861
Molecular Weight (calculated)
13170.6 Da
IEP (calculated)
9.657
GRAVY (calculated)
-0.284
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDINAAARR RVAAAERAEA EKIQQVKRAE GEAESRHLAG VGVARQRQAI VDGLRRFVPD EKSVMDMVLA TQYFDTIRDI GATSRAATVF IPHGPAAVHD
101: VAAQVRDGVL QAAAYNPYAG TK
101: VAAQVRDGVL QAAAYNPYAG TK
001: MGNLFCCVLV KQSDVAVKER FGKFQKVLNP GLQFVPWVIG DYVAGTLTLR LQQLDVQCET KTKDNVFVTV VASIQYRVLA DKASDAFYRL SNPTTQIKAY
101: VFDVIRACVP KLNLDDVFEQ KNEIAKSVEE ELDKAMTAYG YEILQTLIID IEPDQQVKRA MNEINAAARM RVAASEKAEA EKIIQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAGNVPGTSA KDVLDMVMMT QYFDTMRDIG ATSKSSAVFI PHGPGAVSDV AAQIRNGLLQ ANNAS
101: VFDVIRACVP KLNLDDVFEQ KNEIAKSVEE ELDKAMTAYG YEILQTLIID IEPDQQVKRA MNEINAAARM RVAASEKAEA EKIIQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAGNVPGTSA KDVLDMVMMT QYFDTMRDIG ATSKSSAVFI PHGPGAVSDV AAQIRNGLLQ ANNAS
Arabidopsis Description
HIR3HIR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7M0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.