Factsheet for Os09t0361200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 18557835
vacuole: 18557835
nucleus: 24133045
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 24133045 doi

DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty

National Institute of Plant Genome Research, New Delhi, India.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96630	Sorghum	cytosol	93.38	94.37
Zm00001d005648_P002	Maize	cytosol, mitochondrion, plasma membrane	92.68	93.66
TraesCS5D01G195900.1	Wheat	cytosol	90.24	91.2
TraesCS5B01G188800.1	Wheat	cytosol, golgi, unclear	90.24	91.2
TraesCS5A01G193500.1	Wheat	cytosol	90.24	91.2
Os08t0398400-01	Rice	plasma membrane	89.9	90.85
HORVU5Hr1G056950.4	Barley	cytosol	89.2	89.82
PGSC0003DMT400005236	Potato	cytosol	84.32	84.62
KRH69355	Soybean	cytosol	83.97	84.27
GSMUA_Achr6P35920_001	Banana	cytosol	82.58	83.16
AT1G69840.3	Thale cress	cytosol	82.58	82.87
Os05t0591900-05	Rice	cytosol	82.93	82.64
KRH74781	Soybean	cytosol	79.79	80.07
KRG99161	Soybean	cytosol	79.44	79.72
KRH69350	Soybean	cytosol	79.44	78.89
KRH69356	Soybean	cytosol	78.4	78.4
PGSC0003DMT400002232	Potato	cytosol	69.34	73.16
KRH45847	Soybean	cytosol	16.38	65.28
Os01t0588400-01	Rice	plasma membrane	67.94	62.7
VIT_01s0026g01640.t01	Wine grape	extracellular	81.18	62.47
Os06t0136000-01	Rice	plasma membrane	58.19	57.99
Os01t0588100-00	Rice	cytosol	55.75	50.96
KRH69353	Soybean	cytosol	20.91	43.17
Os06t0135000-01	Rice	extracellular	8.01	29.49

Protein Annotations

EnsemblPlants:Os09t0361200-01	EnsemblPlantsGene:Os09g0361200	EntrezGene:4346849	Gene3D:3.30.479.30	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf
ncoils:Coil	PANTHER:PTHR43327	PANTHER:PTHR43327:SF13	PFAM:PF01145	ProteinID:BAD23328.1	ProteinID:BAT07693.1
ProteinID:EEE69559.1	RefSeq:XP_015611758.1	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI00003B05F2	UniProt:Q6K550
MapMan:35.1	:	:	:	:	:

Description

HIRL2Similar to hypersensitive-induced response protein. (Os09t0361200-01)

Coordinates

chr9:+:11796046..11798919

Molecular Weight (calculated)

31607.8 Da

IEP (calculated)

4.972

GRAVY (calculated)

-0.164

Length

287 amino acids

Sequence
(BLAST)

001: MGQCLGLVQI DQSTVAIKEN FGKFSEVLEP GCHFLPWCIG QQIAGYLSLR VKQLDVRCET KTKDNVFVTV VASVQYRALA DKASDAFYKL SNTREQIQSY
101: VFDVIRATVP KLNLDDAFEQ KNDIAKAVED ELEKAMSAYG YEIVQTLIID IEPDVHVKRA MNEINAAARL RVAANEKAEA EKILQIKKAE GEAESKYLAG
201: VGIARQRQAI VDGLRDSVLA FSENVPGTTA KDIMDMVLVT QYFDTMKEIG ASSKSTSVFI PHGPGAVKDV AAQIRDGLLQ ANAERND

Best Arabidopsis Sequence Match ( AT1G69840.3 )
(BLAST)

001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE

Arabidopsis Description

HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.