Factsheet for Bra029166.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38872	Canola	cytosol	99.32	99.32
CDY32626	Canola	cytosol	98.63	98.63
AT5G51570.1	Thale cress	cytosol	92.47	92.47
PGSC0003DMT400079622	Potato	cytosol	83.22	83.79
PGSC0003DMT400070532	Potato	cytosol	83.56	83.56
Solyc03g007190.2.1	Tomato	cytosol, nucleus, plastid	82.88	83.45
KRH09235	Soybean	cytosol	82.19	82.19
VIT_16s0022g01690.t01	Wine grape	cytosol	81.16	82.01
KRH38733	Soybean	endoplasmic reticulum	81.85	81.85
GSMUA_Achr1P16680_001	Banana	cytosol, extracellular	77.4	77.93
Os06t0136000-01	Rice	plasma membrane	76.03	77.08
Zm00001d036073_P002	Maize	plasma membrane	75.68	76.74
EER89146	Sorghum	extracellular	75.68	76.74
HORVU7Hr1G017190.1	Barley	vacuole	73.63	74.65
TraesCS4A01G372600.1	Wheat	golgi	73.63	74.65
TraesCS7A01G074700.1	Wheat	extracellular	73.63	74.65
TraesCS7D01G069900.1	Wheat	extracellular	73.63	74.65
Bra010119.1-P	Field mustard	cytosol	58.56	59.58
Bra029247.1-P	Field mustard	cytosol	57.88	58.88
Bra008363.1-P	Field mustard	cytosol	47.95	58.82
Bra010118.1-P	Field mustard	cytosol	57.53	58.54
Bra007885.1-P	Field mustard	cytosol	56.51	57.89
Bra016261.1-P	Field mustard	cytosol	56.16	57.34
Bra039130.1-P	Field mustard	cytosol	55.48	56.64
Bra001009.1-P	Field mustard	cytosol	55.48	56.64
Os06t0135000-01	Rice	extracellular	11.99	44.87
Bra029004.1-P	Field mustard	cytosol	14.04	28.67

Protein Annotations

Gene3D:3.30.479.30	MapMan:35.1	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	EnsemblPlantsGene:Bra029166	EnsemblPlants:Bra029166.1
EnsemblPlants:Bra029166.1-P	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0005794	GO:GO:0005886	GO:GO:0009506	GO:GO:0016020	UniProt:M4EK49
PFAM:PF01145	PANTHER:PTHR43327	PANTHER:PTHR43327:SF11	SMART:SM00244	SUPFAM:SSF117892	UniParc:UPI00025400F2

Description

AT5G51570 (E=2e-153) | band 7 family protein

Coordinates

chrA03:-:6663308..6664763

Molecular Weight (calculated)

32439.0 Da

IEP (calculated)

5.078

GRAVY (calculated)

-0.160

Length

292 amino acids

Sequence
(BLAST)

001: MGNTNCIVGG CIDQASVGVV ERWGRFEHIA EPGCHFFNPL AGQWLAGVLS TRINSLDVKI ETKTKDNVFV QLICSIQYRV VKTNADDAFY ELQNPREQIQ
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI MNFSSKVEGT SSKDIMDLIM ITQYFDTMRD LGSSSKNTTV FLPHGPGHVR DISDQIRNGL MEANSARVSD EV

Best Arabidopsis Sequence Match ( AT5G51570.1 )
(BLAST)

001: MGNTYCILGG CIEQASVGVV ERWGRFEHIA EPGCHFFNPL AGQWLAGVLS TRIKSLDVKI ETKTKDNVFV QLVCSIQYRV VKASADDAFY ELQNPKEQIQ
101: AYVFDVVRAL VPMMTLDALF EQKGEVAKSV LEELEKVMGA YGYSIEHILM VDIIPDPSVR KAMNEINAAQ RLQLASVYKG EAEKILQVKR AEAEAEAKYL
201: GGVGVARQRQ AITDGLRENI LNFSDKVEGT SAKEVMDLIM ITQYFDTIRD LGNSSKNTTV FLPHGPGHVR DISDQIRNGM MEAAASTQVN DV

Arabidopsis Description

HIR4Hypersensitive-induced response protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.