Factsheet for Bra007885.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56083	Canola	cytosol	100.0	100.0
CDY64507	Canola	cytosol	98.95	98.95
Bra016261.1-P	Field mustard	cytosol	97.54	97.2
AT1G69840.3	Thale cress	cytosol	94.74	94.41
KRH69355	Soybean	cytosol	85.26	84.97
PGSC0003DMT400005236	Potato	cytosol	84.56	84.27
KRG99161	Soybean	cytosol	84.21	83.92
Bra029247.1-P	Field mustard	cytosol	84.21	83.62
Bra010119.1-P	Field mustard	cytosol	83.86	83.28
Bra008363.1-P	Field mustard	cytosol	67.72	81.09
Bra010118.1-P	Field mustard	cytosol	81.4	80.84
KRH74781	Soybean	cytosol	81.05	80.77
KRH69350	Soybean	cytosol	81.05	79.93
KRH69356	Soybean	cytosol	79.65	79.09
PGSC0003DMT400002232	Potato	cytosol	72.28	75.74
Bra039130.1-P	Field mustard	cytosol	74.74	74.48
Bra001009.1-P	Field mustard	cytosol	74.39	74.13
KRH45847	Soybean	cytosol	18.25	72.22
VIT_01s0026g01640.t01	Wine grape	extracellular	86.67	66.22
Bra029166.1-P	Field mustard	cytosol	57.89	56.51
KRH69353	Soybean	cytosol	22.46	46.04
Bra029004.1-P	Field mustard	cytosol	18.95	37.76

Protein Annotations

EnsemblPlants:Bra007885.1	EnsemblPlants:Bra007885.1-P	EnsemblPlantsGene:Bra007885	Gene3D:3.30.479.30	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf
ncoils:Coil	PANTHER:PTHR43327	PANTHER:PTHR43327:SF13	PFAM:PF01145	SEG:seg	SMART:SM00244
SUPFAM:SSF117892	UniParc:UPI000254687C	UniProt:M4CUJ0	MapMan:35.1	:	:

Description

AT1G69840 (E=1e-142) | band 7 family protein

Coordinates

chrA02:-:11582954..11584147

Molecular Weight (calculated)

31220.3 Da

IEP (calculated)

5.433

GRAVY (calculated)

-0.187

Length

285 amino acids

Sequence
(BLAST)

001: MGQVLGCVQV DQSTVAIKET FGKFDDVLQP GCHCMPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVES ELEKAMSHYG YEIVQTLIVD IEPDVHVKKA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKDIG ASSKSNAVFI PHGPGAVKDI ASQIRDGLLQ GKAAE

Best Arabidopsis Sequence Match ( AT1G69840.3 )
(BLAST)

001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE

Arabidopsis Description

HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.