Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007885.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY64507 | Canola | cytosol | 98.95 | 98.95 |
| CDY11650 | Canola | cytosol | 97.54 | 97.2 |
| CDY38764 | Canola | cytosol | 97.54 | 97.2 |
| AT1G69840.3 | Thale cress | cytosol | 94.74 | 94.41 |
| KRH69355 | Soybean | cytosol | 85.26 | 84.97 |
| PGSC0003DMT400005236 | Potato | cytosol | 84.56 | 84.27 |
| KRG99161 | Soybean | cytosol | 84.21 | 83.92 |
| KRH74781 | Soybean | cytosol | 81.05 | 80.77 |
| KRH69350 | Soybean | cytosol | 81.05 | 79.93 |
| KRH69356 | Soybean | cytosol | 79.65 | 79.09 |
| PGSC0003DMT400002232 | Potato | cytosol | 72.28 | 75.74 |
| CDY37535 | Canola | cytosol | 74.74 | 74.48 |
| CDY49041 | Canola | cytosol | 74.74 | 74.48 |
| CDX91951 | Canola | cytosol | 74.39 | 74.13 |
| CDX74295 | Canola | cytosol | 74.39 | 74.13 |
| KRH45847 | Soybean | cytosol | 18.25 | 72.22 |
| VIT_01s0026g01640.t01 | Wine grape | extracellular | 86.67 | 66.22 |
| CDY38872 | Canola | cytosol | 57.54 | 56.16 |
| CDY32626 | Canola | cytosol | 57.19 | 55.82 |
| KRH69353 | Soybean | cytosol | 22.46 | 46.04 |
| CDY64099 | Canola | cytosol, nucleus | 23.16 | 29.07 |
Protein Annotations
| EnsemblPlants:CDY56083 | EnsemblPlantsGene:GSBRNA2T00017801001 | Gene3D:3.30.479.30 | GO:A0A078IWK8 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf |
| ncoils:Coil | PANTHER:PTHR43327 | PANTHER:PTHR43327:SF13 | PFAM:PF01145 | ProteinID:CDY56083 | ProteinID:CDY56083.1 |
| SEG:seg | SMART:SM00244 | SUPFAM:SSF117892 | UniParc:UPI000254687C | UniProt:A0A078IWK8 | MapMan:35.1 |
Description
BnaA02g35710DBnaA02g35710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWK8]
Coordinates
chrLK033456:-:14656..16543
Molecular Weight (calculated)
31220.3 Da
IEP (calculated)
5.433
GRAVY (calculated)
-0.187
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQVLGCVQV DQSTVAIKET FGKFDDVLQP GCHCMPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVES ELEKAMSHYG YEIVQTLIVD IEPDVHVKKA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKDIG ASSKSNAVFI PHGPGAVKDI ASQIRDGLLQ GKAAE
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVES ELEKAMSHYG YEIVQTLIVD IEPDVHVKKA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKDIG ASSKSNAVFI PHGPGAVKDI ASQIRDGLLQ GKAAE
001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
Arabidopsis Description
HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.