Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029247.1-P | Field mustard | cytosol | 95.1 | 94.77 |
| Bra010119.1-P | Field mustard | cytosol | 94.76 | 94.43 |
| Bra008363.1-P | Field mustard | cytosol | 76.57 | 92.02 |
| Bra010118.1-P | Field mustard | cytosol | 92.31 | 91.99 |
| PGSC0003DMT400083045 | Potato | cytosol | 90.91 | 91.23 |
| Solyc03g113220.2.1 | Tomato | nucleus | 90.21 | 90.53 |
| PGSC0003DMT400065192 | Potato | cytosol | 90.21 | 90.53 |
| KRH03423 | Soybean | cytosol | 88.46 | 89.08 |
| Solyc06g071050.2.1 | Tomato | nucleus | 89.51 | 88.58 |
| KRH56959 | Soybean | cytosol, extracellular | 86.71 | 87.32 |
| Os05t0591900-05 | Rice | cytosol | 87.76 | 87.15 |
| KXG22672 | Sorghum | cytosol | 87.41 | 87.11 |
| TraesCS5A01G212000.1 | Wheat | cytosol | 86.71 | 86.41 |
| TraesCS5B01G211900.1 | Wheat | cytosol, golgi, unclear | 86.71 | 86.41 |
| GSMUA_Achr7P23910_001 | Banana | cytosol, plasma membrane | 86.01 | 86.32 |
| TraesCS5B01G211700.1 | Wheat | cytosol | 86.36 | 86.06 |
| TraesCS5A01G212100.1 | Wheat | cytosol | 86.01 | 85.71 |
| AT1G69840.3 | Thale cress | cytosol | 85.66 | 85.66 |
| TraesCS5D01G221800.1 | Wheat | cytosol | 85.66 | 85.37 |
| HORVU5Hr1G062410.6 | Barley | cytosol | 86.71 | 81.85 |
| AT3G01290.1 | Thale cress | cytosol | 79.72 | 80.0 |
| VIT_17s0000g05680.t01 | Wine grape | extracellular | 90.21 | 79.14 |
| TraesCS5D01G221900.1 | Wheat | cytosol | 86.71 | 77.74 |
| Zm00001d039173_P002 | Maize | plastid | 87.06 | 73.02 |
| GSMUA_Achr6P35910_001 | Banana | cytosol | 83.57 | 71.99 |
| AT5G51570.1 | Thale cress | cytosol | 57.34 | 56.16 |
| VIT_12s0034g00930.t01 | Wine grape | mitochondrion | 29.37 | 40.0 |
| VIT_05s0020g03390.t01 | Wine grape | extracellular | 6.64 | 13.19 |
Protein Annotations
| Gene3D:3.30.479.30 | MapMan:35.1 | EntrezGene:836395 | UniProt:A0A178U8N7 | ProteinID:AED97649.1 | ArrayExpress:AT5G62740 |
| EnsemblPlantsGene:AT5G62740 | RefSeq:AT5G62740 | TAIR:AT5G62740 | RefSeq:AT5G62740-TAIR-G | EnsemblPlants:AT5G62740.1 | TAIR:AT5G62740.1 |
| EMBL:AY062850 | EMBL:AY086631 | EMBL:AY114572 | ProteinID:BAB10843.1 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0009506 | GO:GO:0016020 | GO:GO:0043424 | Symbol:HIR1 | RefSeq:NP_201080.1 | ProteinID:OAO90206.1 |
| PFAM:PF01145 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR43327 | PANTHER:PTHR43327:SF6 | UniProt:Q9FM19 | SMART:SM00244 | SUPFAM:SSF117892 | UniParc:UPI00000A2763 |
Description
HIR1HIR4 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N7]
Coordinates
chr5:+:25200838..25202839
Molecular Weight (calculated)
31432.7 Da
IEP (calculated)
5.070
GRAVY (calculated)
-0.101
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNLFCCVQV DQSTVAIKET FGKFEDVLEP GCHFLPWCLG SQVAGYLSLR VQQLDVRCET KTKDNVFVNV VASIQYRALA NKANDAYYKL SNTRGQIQAY
101: VFDVIRASVP KLLLDDVFEQ KNDIAKAVEE ELEKAMSAYG YEIVQTLIVD IEPDEHVKRA MNEINAAARM RLAANEKAEA EKILQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAVNVPGTTA KDVMDMVLVT QYFDTMKEIG ASSKSSAVFI PHGPGAVRDV ASQIRDGLLQ GSSANL
101: VFDVIRASVP KLLLDDVFEQ KNDIAKAVEE ELEKAMSAYG YEIVQTLIVD IEPDEHVKRA MNEINAAARM RLAANEKAEA EKILQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAVNVPGTTA KDVMDMVLVT QYFDTMKEIG ASSKSSAVFI PHGPGAVRDV ASQIRDGLLQ GSSANL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.