CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0398400-01	Rice	plasma membrane	67.07	97.54
Zm00001d050265_P001	Maize	cytosol, extracellular, mitochondrion, plasma membrane	67.55	93.94
HORVU2Hr1G012690.1	Barley	cytosol	53.27	91.67
TraesCS5A01G497400.1	Wheat	cytosol	62.71	91.2
TraesCS4D01G322000.1	Wheat	cytosol	62.71	91.2
TraesCS4B01G325100.1	Wheat	golgi	62.71	91.2
EER96630	Sorghum	cytosol	61.99	90.14
HORVU4Hr1G082240.6	Barley	cytosol	62.23	89.24
GSMUA_Achr6P35920_001	Banana	cytosol	58.84	85.26
PGSC0003DMT400005236	Potato	cytosol	58.6	84.62
AT1G69840.3	Thale cress	cytosol	57.87	83.57
KXG22672	Sorghum	cytosol	57.87	83.28
KRH69355	Soybean	cytosol	57.63	83.22
KRG99161	Soybean	cytosol	56.9	82.17
OQU91678	Sorghum	cytosol	20.1	79.05
KRH74781	Soybean	cytosol	54.48	78.67
KRH69356	Soybean	cytosol	54.24	78.05
KRH69350	Soybean	cytosol	54.48	77.85
PGSC0003DMT400002232	Potato	cytosol	48.67	73.9
KRH45847	Soybean	cytosol	12.35	70.83
EES03186	Sorghum	cytosol	49.88	69.83
Solyc03g058940.2.1	Tomato	cytosol	13.56	67.47
VIT_01s0026g01640.t01	Wine grape	extracellular	60.53	67.02
EER89146	Sorghum	extracellular	41.16	59.03
KRH69353	Soybean	cytosol	15.01	44.6
Bra029004.1-P	Field mustard	cytosol	14.53	41.96
CDY64099	Canola	cytosol, nucleus	17.19	31.28

Protein Annotations

EnsemblPlants:KXG25127	EnsemblPlantsGene:SORBI_3007G120401	Gene3D:3.30.479.30	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Band_7	InterPro:Band_7/SPFH_dom_sf	PANTHER:PTHR43327
PANTHER:PTHR43327:SF13	PFAM:PF01145	ProteinID:KXG25127	ProteinID:KXG25127.2	SEG:seg	SMART:SM00244
SUPFAM:SSF117892	UniParc:UPI000B8BA6C6	UniProt:A0A1B6PHN3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr7:+:52081340..52086117

Molecular Weight (calculated)

45021.5 Da

IEP (calculated)

6.802

GRAVY (calculated)

-0.352

Length

413 amino acids

Sequence
(BLAST)

001: MWLAARAHLA VLAGEATRGY RSGSRRRQGG PSPSRSLAEQ GHPAGGGQTG AAQLPRGPAP IPLSSLANLS PVALPSLPVP DAQQFRHKYR RSRASDNPVD
101: GAARRPDEGK PFSSQYSTSL RLDPPPEEDM GQALGLVQVD QSTVAIKESF GKFDEILEPG CHFLPWCIGK QIAGYLSLRV QQLDVRCETK TKDNVFVNVV
201: ASVQYRALAD KASDAFYRLS NTREQIQSYV FDVIRASVPK MNLDDAFEQK NEIAKAVEDE LEKAMSMYGY EIVQTLIVDI EPDEHVKRAM NEINAAARLR
301: LAATEKAEAE KILQIKRAEG DAESKYLAGL GIARQRQAIV DGLRDSVLAF SENVPGTSAK DVMDMVLVTQ YFDTMKEIGA SSKSSSVFIP HGPGAVRDIA
401: AQIRDGQLQA SLL

Best Arabidopsis Sequence Match ( AT5G62740.1 )
(BLAST)

001: MGNLFCCVQV DQSTVAIKET FGKFEDVLEP GCHFLPWCLG SQVAGYLSLR VQQLDVRCET KTKDNVFVNV VASIQYRALA NKANDAYYKL SNTRGQIQAY
101: VFDVIRASVP KLLLDDVFEQ KNDIAKAVEE ELEKAMSAYG YEIVQTLIVD IEPDEHVKRA MNEINAAARM RLAANEKAEA EKILQIKRAE GEAESKYLSG
201: LGIARQRQAI VDGLRDSVLG FAVNVPGTTA KDVMDMVLVT QYFDTMKEIG ASSKSSAVFI PHGPGAVRDV ASQIRDGLLQ GSSANL

Arabidopsis Description

HIR1HIR4 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.