Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029004.1-P | Field mustard | cytosol | 48.19 | 27.97 |
| HORVU2Hr1G012690.1 | Barley | cytosol | 66.27 | 22.92 |
| CDY64099 | Canola | cytosol, nucleus | 62.65 | 22.91 |
| Solyc02g067470.2.1 | Tomato | endoplasmic reticulum, nucleus | 65.06 | 22.78 |
| KRH69355 | Soybean | cytosol | 68.67 | 19.93 |
| Os08t0398400-01 | Rice | plasma membrane | 67.47 | 19.72 |
| TraesCS5A01G497400.1 | Wheat | cytosol | 66.27 | 19.37 |
| TraesCS4D01G322000.1 | Wheat | cytosol | 66.27 | 19.37 |
| TraesCS4B01G325100.1 | Wheat | golgi | 66.27 | 19.37 |
| HORVU4Hr1G082240.6 | Barley | cytosol | 66.27 | 19.1 |
| KRH69350 | Soybean | cytosol | 66.27 | 19.03 |
| Solyc03g113220.2.1 | Tomato | nucleus | 65.06 | 18.95 |
| KRG99161 | Soybean | cytosol | 65.06 | 18.88 |
| Zm00001d050265_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 67.47 | 18.86 |
| Solyc06g071050.2.1 | Tomato | nucleus | 65.06 | 18.69 |
| KRH74781 | Soybean | cytosol | 62.65 | 18.18 |
| KRH69356 | Soybean | cytosol | 62.65 | 18.12 |
| AT1G69840.3 | Thale cress | cytosol | 61.45 | 17.83 |
| GSMUA_Achr6P35920_001 | Banana | cytosol | 59.04 | 17.19 |
| Solyc01g010770.2.1 | Tomato | cytosol | 49.4 | 15.07 |
| VIT_01s0026g01640.t01 | Wine grape | extracellular | 63.86 | 14.21 |
| Solyc03g007190.2.1 | Tomato | cytosol, nucleus, plastid | 49.4 | 14.14 |
| KXG25127 | Sorghum | mitochondrion | 67.47 | 13.56 |
| KRH69353 | Soybean | cytosol | 12.05 | 7.19 |
| Solyc03g058930.2.1 | Tomato | cytosol, nucleus | 7.23 | 5.61 |
| KRH45847 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc03g058940.2.1 | EnsemblPlantsGene:Solyc03g058940.2 | Gene3D:3.30.479.30 | InterPro:Band_7 | InterPro:Band_7/SPFH_dom_sf | PANTHER:PTHR43327 |
| PANTHER:PTHR43327:SF13 | PFAM:PF01145 | SUPFAM:SSF117892 | UniParc:UPI0002768CD7 | UniProt:K4BGU1 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3:-:26853446..26854053
Molecular Weight (calculated)
9311.5 Da
IEP (calculated)
4.400
GRAVY (calculated)
0.237
Length
83 amino acids
Sequence
(BLAST)
(BLAST)
1: MGLDAAFEQK NEIASAVEKE LEKAMSAYGY EIVQTLIVDI EPDIHVKRAM NQINAVMDKL KSERQVCLLI VCLDYLVPVT ILS
001: MGQALGCIQV DQSNVAIKET FGKFDEVLEP GCHCLPWCLG SQVAGHLSLR VQQLDVRCET KTKDNVFVTV VASIQYRALA ESAQDAFYKL SNTRNQIQAY
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
101: VFDVIRASVP KLDLDSTFEQ KNDIAKTVET ELEKAMSHYG YEIVQTLIVD IEPDVHVKRA MNEINAASRM REAASEKAEA EKILQIKRAE GEAESKYLSG
201: MGIARQRQAI VDGLRNSVLA FSESVPGTSS KDVMDMVLVT QYFDTLKEIG ASSKSNSVFI PHGPGAVRDI ASQIRDGLLQ GNSAAE
Arabidopsis Description
HIR2Hypersensitive-induced response protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAR7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.