Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25258 | Canola | cytosol, plasma membrane | 100.0 | 100.0 |
| Bra037917.1-P | Field mustard | cytosol | 99.48 | 99.48 |
| CDX94253 | Canola | cytosol | 99.48 | 99.48 |
| AT4G10450.1 | Thale cress | cytosol | 94.33 | 94.33 |
| Bra039999.1-P | Field mustard | cytosol | 89.69 | 89.69 |
| Bra035980.1-P | Field mustard | cytosol | 88.14 | 88.14 |
| PGSC0003DMT400064920 | Potato | cytosol | 85.05 | 85.05 |
| GSMUA_Achr2P00380_001 | Banana | cytosol | 43.3 | 84.85 |
| Solyc08g014550.2.1 | Tomato | cytosol, extracellular, nucleus | 84.54 | 84.54 |
| KRH64280 | Soybean | nucleus | 83.51 | 84.38 |
| KRH53656 | Soybean | cytosol | 83.51 | 84.38 |
| KRH53658 | Soybean | cytosol | 83.51 | 84.38 |
| KRH53659 | Soybean | nucleus | 83.51 | 84.38 |
| Solyc06g073310.2.1 | Tomato | nucleus, plastid | 84.02 | 84.02 |
| Solyc12g096700.1.1 | Tomato | nucleus | 84.02 | 84.02 |
| VIT_16s0098g00730.t01 | Wine grape | cytosol | 83.51 | 83.94 |
| PGSC0003DMT400075242 | Potato | cytosol | 79.9 | 83.78 |
| PGSC0003DMT400069184 | Potato | cytosol | 79.38 | 83.24 |
| VIT_09s0002g01620.t01 | Wine grape | cytosol | 82.47 | 82.9 |
| GSMUA_Achr11P... | Banana | cytosol, plasma membrane | 42.27 | 82.0 |
| GSMUA_Achr5P20390_001 | Banana | cytosol | 41.24 | 80.0 |
| TraesCS3B01G007200.1 | Wheat | cytosol, nucleus | 77.32 | 79.37 |
| TraesCS3B01G011300.1 | Wheat | cytosol | 77.32 | 79.37 |
| TraesCS3B01G006500.1 | Wheat | cytosol | 76.8 | 78.84 |
| TraesCS3A01G007300.1 | Wheat | cytosol | 76.8 | 78.84 |
| TraesCS3B01G011900.1 | Wheat | cytosol | 76.8 | 78.84 |
| HORVU7Hr1G002060.1 | Barley | cytosol | 76.8 | 78.84 |
| TraesCS3D01G003200.1 | Wheat | cytosol | 76.8 | 78.84 |
| TraesCS4A01G472200.1 | Wheat | cytosol | 76.8 | 78.84 |
| TraesCS7A01G020200.1 | Wheat | cytosol | 76.8 | 78.84 |
| Zm00001d054084_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 76.8 | 78.42 |
| EER89049 | Sorghum | cytosol | 76.8 | 78.42 |
| Bra000049.1-P | Field mustard | cytosol | 24.23 | 78.33 |
| TraesCS3D01G003800.1 | Wheat | cytosol | 76.29 | 78.31 |
| Zm00001d035902_P001 | Maize | cytosol | 76.29 | 77.89 |
| Zm00001d035901_P001 | Maize | plasma membrane, plastid | 76.29 | 77.89 |
| Zm00001d045578_P001 | Maize | plastid | 75.77 | 77.37 |
| Zm00001d045577_P003 | Maize | cytosol | 75.77 | 77.37 |
| OQU84143 | Sorghum | cytosol | 56.19 | 76.76 |
| Os09t0485900-01 | Rice | cytosol | 74.74 | 76.32 |
| HORVU0Hr1G006040.1 | Barley | cytosol | 19.59 | 71.7 |
| KRH64273 | Soybean | endoplasmic reticulum, nucleus | 67.53 | 70.05 |
| HORVU0Hr1G006020.2 | Barley | cytosol, plastid | 76.8 | 68.04 |
| HORVU7Hr1G043940.1 | Barley | cytosol | 30.93 | 65.93 |
| HORVU2Hr1G058720.1 | Barley | cytosol | 29.9 | 63.74 |
| HORVU3Hr1G001140.5 | Barley | plastid | 76.8 | 63.68 |
| Solyc06g034380.1.1 | Tomato | cytosol | 41.75 | 61.36 |
| KRH30764 | Soybean | cytosol | 29.38 | 61.29 |
| Solyc12g017290.1.1 | Tomato | cytosol | 40.21 | 60.47 |
| TraesCS7D01G016500.2 | Wheat | nucleus | 76.8 | 56.23 |
Protein Annotations
| MapMan:17.1.2.1.8 | Gene3D:3.90.930.12 | EnsemblPlantsGene:Bra033171 | EnsemblPlants:Bra033171.1 | EnsemblPlants:Bra033171.1-P | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019843 | InterPro:IPR036789 |
| UniProt:M4EWI7 | PFAM:PF00347 | PIRSF:PIRSF002162 | ScanProsite:PS00700 | PANTHER:PTHR11655 | PANTHER:PTHR11655:SF23 |
| InterPro:Ribosomal_L6 | InterPro:Ribosomal_L6_CS2 | InterPro:Ribosomal_L6_a/b-dom | InterPro:Ribosomal_L6_a/b-dom_sf | SUPFAM:SSF56053 | UniParc:UPI00025455D2 |
Description
AT4G10450 (E=3e-100) | 60S ribosomal protein L9 (RPL90D)
Coordinates
chrA02:+:17215508..17216389
Molecular Weight (calculated)
21815.7 Da
IEP (calculated)
10.266
GRAVY (calculated)
-0.219
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTILSSETM DIPEGVVIKV HAKVIEVEGP RGKLTRDFKH LNLDFQLIKD AVTGKRQLKI DSWFGSRKAS ASIRTALSHV SNLIAGVTQG FLYKMRFVYA
101: HFPINASISG NNKSIEIRNF LGEKKVRKVD MLDGVTIVRS EKVKDEITLE GNDIELVSRS CALINQKCHV KKKDIRKFLD GIYVSEKGKI AVEE
101: HFPINASISG NNKSIEIRNF LGEKKVRKVD MLDGVTIVRS EKVKDEITLE GNDIELVSRS CALINQKCHV KKKDIRKFLD GIYVSEKGKI AVEE
001: MKTILSSETM DIPDGVAIKV NAKVIEVEGP RGKLTRDFKH LNLDFQLIKD QVTGKRQLKI DSWFGSRKTS ASIRTALSHV DNLIAGVTQG FLYRMRFVYA
101: HFPINASIDG NNKSIEIRNF LGEKKVRKVE MLDGVKIVRS EKVKDEIILE GNDIELVSRS CALINQKCHV KKKDIRKFLD GIYVSEKGKI AVEE
101: HFPINASIDG NNKSIEIRNF LGEKKVRKVE MLDGVKIVRS EKVKDEIILE GNDIELVSRS CALINQKCHV KKKDIRKFLD GIYVSEKGKI AVEE
Arabidopsis Description
RPL9D60S ribosomal protein L9-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZX9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.