CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035902_P001	Maize	cytosol	99.47	99.47
Zm00001d035901_P001	Maize	plasma membrane, plastid	99.47	99.47
Zm00001d045578_P001	Maize	plastid	98.42	98.42
Zm00001d045577_P003	Maize	cytosol	98.42	98.42
OQU84143	Sorghum	cytosol	70.0	93.66
Os09t0485900-01	Rice	cytosol	93.16	93.16
HORVU7Hr1G002060.1	Barley	cytosol	88.95	89.42
GSMUA_Achr11P...	Banana	cytosol, plasma membrane	46.84	89.0
TraesCS3A01G007300.1	Wheat	cytosol	88.42	88.89
TraesCS3B01G006500.1	Wheat	cytosol	88.42	88.89
TraesCS3B01G007200.1	Wheat	cytosol, nucleus	88.42	88.89
TraesCS7A01G020200.1	Wheat	cytosol	88.42	88.89
TraesCS3B01G011900.1	Wheat	cytosol	88.42	88.89
TraesCS3B01G011300.1	Wheat	cytosol	87.89	88.36
TraesCS3D01G003200.1	Wheat	cytosol	87.89	88.36
TraesCS3D01G003800.1	Wheat	cytosol	87.89	88.36
TraesCS4A01G472200.1	Wheat	cytosol	87.89	88.36
GSMUA_Achr5P20390_001	Banana	cytosol	45.79	87.0
GSMUA_Achr2P00380_001	Banana	cytosol	44.74	85.86
HORVU7Hr1G043940.1	Barley	cytosol	39.47	82.42
VIT_16s0098g00730.t01	Wine grape	cytosol	83.68	82.38
VIT_09s0002g01620.t01	Wine grape	cytosol	83.16	81.87
PGSC0003DMT400064920	Potato	cytosol	82.63	80.93
Solyc08g014550.2.1	Tomato	cytosol, extracellular, nucleus	82.11	80.41
KRH64280	Soybean	nucleus	81.05	80.21
Solyc06g073310.2.1	Tomato	nucleus, plastid	81.58	79.9
Solyc12g096700.1.1	Tomato	nucleus	81.58	79.9
PGSC0003DMT400069184	Potato	cytosol	77.37	79.46
PGSC0003DMT400075242	Potato	cytosol	76.84	78.92
HORVU2Hr1G058720.1	Barley	cytosol	37.37	78.02
KRH53658	Soybean	cytosol	78.42	77.6
KRH53659	Soybean	nucleus	78.42	77.6
KRH53656	Soybean	cytosol	78.42	77.6
Bra037917.1-P	Field mustard	cytosol	78.95	77.32
HORVU0Hr1G006020.2	Barley	cytosol, plastid	88.95	77.17
CDX99541	Canola	cytosol	78.95	76.92
CDX86863	Canola	cytosol	78.95	76.92
Bra033171.1-P	Field mustard	cytosol	78.42	76.8
CDY25258	Canola	cytosol, plasma membrane	78.42	76.8
AT1G33140.1	Thale cress	cytosol	77.89	76.29
AT1G33120.1	Thale cress	cytosol	77.89	76.29
CDX94253	Canola	cytosol	77.89	76.29
CDX93796	Canola	cytosol	77.37	75.77
AT4G10450.1	Thale cress	cytosol	77.37	75.77
Bra035980.1-P	Field mustard	cytosol	77.37	75.77
Bra039999.1-P	Field mustard	cytosol	77.37	75.77
CDX87811	Canola	cytosol, extracellular	77.37	75.77
CDX96888	Canola	cytosol	77.37	75.77
CDY14882	Canola	cytosol	77.37	75.77
CDY32946	Canola	cytosol, extracellular	76.84	75.26
CDY43615	Canola	cytosol	66.32	75.0
HORVU3Hr1G001140.5	Barley	plastid	88.95	72.22
KRH64273	Soybean	endoplasmic reticulum, nucleus	67.89	68.98
TraesCS7D01G016500.2	Wheat	nucleus	88.42	63.4
Solyc06g034380.1.1	Tomato	cytosol	41.05	59.09
Solyc12g017290.1.1	Tomato	cytosol	40.0	58.91
CDY07742	Canola	cytosol	18.42	58.33
Bra000049.1-P	Field mustard	cytosol	18.42	58.33
KRH30764	Soybean	cytosol	27.37	55.91

Protein Annotations

MapMan:17.1.2.1.8	Gene3D:3.90.930.12	EntrezGene:8067894	UniProt:C5Z267	EnsemblPlants:EER89049	ProteinID:EER89049
ProteinID:EER89049.1	GO:GO:0002181	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	GO:GO:0019843	GO:GO:0022625	InterPro:IPR036789	PFAM:PF00347
PIRSF:PIRSF002162	ScanProsite:PS00700	PANTHER:PTHR11655	PANTHER:PTHR11655:SF24	InterPro:Ribosomal_L6	InterPro:Ribosomal_L6_CS2
InterPro:Ribosomal_L6_a/b-dom	InterPro:Ribosomal_L6_a/b-dom_sf	EnsemblPlantsGene:SORBI_3010G005300	SUPFAM:SSF56053	unigene:Sbi.4618	UniParc:UPI0001A89995
RefSeq:XP_002437682.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:437432..439264

Molecular Weight (calculated)

21476.3 Da

IEP (calculated)

10.363

GRAVY (calculated)

-0.279

Length

190 amino acids

Sequence
(BLAST)

001: MKTILASETM DIPEGVTVTV AAKLVTVEGP RGKLTRNFKH LNLDFQLQEG GRKLKVDAWF GTRRTMAAIR TAISHVQNLI KGVTKGYRYK MRFVYAHFPI
101: NASITNSNTA IEIRNFLGEK KVRKVDMLDG VTILRSEKVK DELILDGNDI ELVSRSAALI NQKCHVKKKD IRKFLDGIYV SDKGVIEEEQ

Best Arabidopsis Sequence Match ( AT1G33120.1 )
(BLAST)

001: MKTILSSETM DIPDSVTIKV HAKVIEVEGP RGKLVRDFKH LNLDFQLIKD PETGKKKLKI DSWFGTRKTS ASIRTALSHV DNLISGVTRG FRYKMRFVYA
101: HFPINASIGG DGKSIEIRNF LGEKKVRKVE MLDGVTIVRS EKVKDEIVLD GNDIELVSRS CALINQKCHV KKKDIRKFLD GIYVSEKSKI VEEE

Arabidopsis Description

RPL9C60S ribosomal protein L9-1 [Source:UniProtKB/Swiss-Prot;Acc:P49209]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.