Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G33140.1 | Thale cress | cytosol | 100.0 | 100.0 |
| Bra039999.1-P | Field mustard | cytosol | 95.88 | 95.88 |
| CDX87811 | Canola | cytosol, extracellular | 95.88 | 95.88 |
| CDX93796 | Canola | cytosol | 95.88 | 95.88 |
| CDY32946 | Canola | cytosol, extracellular | 95.36 | 95.36 |
| Bra035980.1-P | Field mustard | cytosol | 93.81 | 93.81 |
| CDX96888 | Canola | cytosol | 93.81 | 93.81 |
| CDY14882 | Canola | cytosol | 93.81 | 93.81 |
| CDY43615 | Canola | cytosol | 79.9 | 92.26 |
| AT4G10450.1 | Thale cress | cytosol | 88.14 | 88.14 |
| Solyc08g014550.2.1 | Tomato | cytosol, extracellular, nucleus | 87.11 | 87.11 |
| Solyc06g073310.2.1 | Tomato | nucleus, plastid | 87.11 | 87.11 |
| PGSC0003DMT400064920 | Potato | cytosol | 86.6 | 86.6 |
| PGSC0003DMT400069184 | Potato | cytosol | 82.47 | 86.49 |
| KRH53656 | Soybean | cytosol | 85.57 | 86.46 |
| KRH53658 | Soybean | cytosol | 85.57 | 86.46 |
| KRH53659 | Soybean | nucleus | 85.57 | 86.46 |
| KRH64280 | Soybean | nucleus | 85.05 | 85.94 |
| Solyc12g096700.1.1 | Tomato | nucleus | 85.05 | 85.05 |
| PGSC0003DMT400075242 | Potato | cytosol | 80.93 | 84.86 |
| VIT_09s0002g01620.t01 | Wine grape | cytosol | 83.51 | 83.94 |
| VIT_16s0098g00730.t01 | Wine grape | cytosol | 82.99 | 83.42 |
| GSMUA_Achr2P00380_001 | Banana | cytosol | 41.75 | 81.82 |
| GSMUA_Achr11P... | Banana | cytosol, plasma membrane | 41.24 | 80.0 |
| TraesCS3B01G007200.1 | Wheat | cytosol, nucleus | 77.84 | 79.89 |
| TraesCS3B01G006500.1 | Wheat | cytosol | 77.32 | 79.37 |
| TraesCS3A01G007300.1 | Wheat | cytosol | 77.32 | 79.37 |
| TraesCS3B01G011300.1 | Wheat | cytosol | 77.32 | 79.37 |
| TraesCS3B01G011900.1 | Wheat | cytosol | 77.32 | 79.37 |
| HORVU7Hr1G002060.1 | Barley | cytosol | 77.32 | 79.37 |
| TraesCS7A01G020200.1 | Wheat | cytosol | 77.32 | 79.37 |
| GSMUA_Achr5P20390_001 | Banana | cytosol | 40.72 | 79.0 |
| TraesCS3D01G003200.1 | Wheat | cytosol | 76.8 | 78.84 |
| TraesCS3D01G003800.1 | Wheat | cytosol | 76.8 | 78.84 |
| TraesCS4A01G472200.1 | Wheat | cytosol | 76.8 | 78.84 |
| EER89049 | Sorghum | cytosol | 76.29 | 77.89 |
| OQU84143 | Sorghum | cytosol | 56.7 | 77.46 |
| Zm00001d035901_P001 | Maize | plasma membrane, plastid | 75.77 | 77.37 |
| Zm00001d035902_P001 | Maize | cytosol | 75.77 | 77.37 |
| Os09t0485900-01 | Rice | cytosol | 74.74 | 76.32 |
| Zm00001d045577_P003 | Maize | cytosol | 74.74 | 76.32 |
| Zm00001d045578_P001 | Maize | plastid | 74.74 | 76.32 |
| Zm00001d054084_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 74.74 | 76.32 |
| HORVU0Hr1G006040.1 | Barley | cytosol | 19.59 | 71.7 |
| KRH64273 | Soybean | endoplasmic reticulum, nucleus | 69.07 | 71.66 |
| HORVU0Hr1G006020.2 | Barley | cytosol, plastid | 77.32 | 68.49 |
| HORVU7Hr1G043940.1 | Barley | cytosol | 31.96 | 68.13 |
| HORVU2Hr1G058720.1 | Barley | cytosol | 30.41 | 64.84 |
| HORVU3Hr1G001140.5 | Barley | plastid | 77.32 | 64.1 |
| KRH30764 | Soybean | cytosol | 29.38 | 61.29 |
| Solyc06g034380.1.1 | Tomato | cytosol | 41.24 | 60.61 |
| Solyc12g017290.1.1 | Tomato | cytosol | 39.18 | 58.91 |
| TraesCS7D01G016500.2 | Wheat | nucleus | 77.32 | 56.6 |
Protein Annotations
| MapMan:17.1.2.1.8 | Gene3D:3.90.930.12 | EntrezGene:840208 | EntrezGene:840211 | UniProt:A0A178W8D1 | ProteinID:AAF97345.1 |
| ProteinID:AAF97348.1 | ProteinID:AEE31568.1 | ProteinID:AEE31569.1 | EMBL:AF324688 | EMBL:AF326873 | EMBL:AF339694 |
| EMBL:AF375419 | ArrayExpress:AT1G33120 | EnsemblPlantsGene:AT1G33120 | RefSeq:AT1G33120 | TAIR:AT1G33120 | RefSeq:AT1G33120-TAIR-G |
| EnsemblPlants:AT1G33120.1 | TAIR:AT1G33120.1 | EMBL:AY039593 | EMBL:AY054156 | EMBL:AY058051 | EMBL:AY072446 |
| EMBL:AY128910 | Unigene:At.68560 | GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0005886 | GO:GO:0006412 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009941 | GO:GO:0009955 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0019843 | GO:GO:0022625 | GO:GO:0022626 |
| GO:GO:0030529 | InterPro:IPR036789 | RefSeq:NP_564417.1 | RefSeq:NP_564418.1 | ProteinID:OAP14710.1 | ProteinID:OAP16811.1 |
| UniProt:P49209 | PFAM:PF00347 | PIRSF:PIRSF002162 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0009001 |
| PO:PO:0009025 | ScanProsite:PS00700 | PANTHER:PTHR11655 | PANTHER:PTHR11655:SF23 | InterPro:Ribosomal_L6 | InterPro:Ribosomal_L6_CS2 |
| InterPro:Ribosomal_L6_a/b-dom | InterPro:Ribosomal_L6_a/b-dom_sf | SUPFAM:SSF56053 | UniParc:UPI00000014E9 | EMBL:X91958 | EMBL:Z17727 |
| EMBL:Z17728 | : | : | : | : | : |
Description
RPL9C60S ribosomal protein L9-1 [Source:UniProtKB/Swiss-Prot;Acc:P49209]
Coordinates
chr1:+:12010879..12012547
Molecular Weight (calculated)
22018.9 Da
IEP (calculated)
10.137
GRAVY (calculated)
-0.351
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTILSSETM DIPDSVTIKV HAKVIEVEGP RGKLVRDFKH LNLDFQLIKD PETGKKKLKI DSWFGTRKTS ASIRTALSHV DNLISGVTRG FRYKMRFVYA
101: HFPINASIGG DGKSIEIRNF LGEKKVRKVE MLDGVTIVRS EKVKDEIVLD GNDIELVSRS CALINQKCHV KKKDIRKFLD GIYVSEKSKI VEEE
101: HFPINASIGG DGKSIEIRNF LGEKKVRKVE MLDGVTIVRS EKVKDEIVLD GNDIELVSRS CALINQKCHV KKKDIRKFLD GIYVSEKSKI VEEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.