Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol, plasma membrane | 61.97 | 88.0 |
| GSMUA_Achr5P20390_001 | Banana | cytosol | 61.27 | 87.0 |
| GSMUA_Achr2P00380_001 | Banana | cytosol | 59.15 | 84.85 |
| EER89049 | Sorghum | cytosol | 93.66 | 70.0 |
| Zm00001d054084_P001 | Maize | cytosol, extracellular, mitochondrion, plasma membrane | 92.96 | 69.47 |
| Os09t0485900-01 | Rice | cytosol | 91.55 | 68.42 |
| HORVU7Hr1G002060.1 | Barley | cytosol | 90.85 | 68.25 |
| TraesCS3B01G011900.1 | Wheat | cytosol | 90.14 | 67.72 |
| TraesCS3B01G007200.1 | Wheat | cytosol, nucleus | 90.14 | 67.72 |
| TraesCS3B01G006500.1 | Wheat | cytosol | 90.14 | 67.72 |
| TraesCS3A01G007300.1 | Wheat | cytosol | 90.14 | 67.72 |
| TraesCS7A01G020200.1 | Wheat | cytosol | 90.14 | 67.72 |
| TraesCS3D01G003200.1 | Wheat | cytosol | 89.44 | 67.2 |
| TraesCS3B01G011300.1 | Wheat | cytosol | 89.44 | 67.2 |
| TraesCS3D01G003800.1 | Wheat | cytosol | 89.44 | 67.2 |
| TraesCS4A01G472200.1 | Wheat | cytosol | 89.44 | 67.2 |
| CDY43615 | Canola | cytosol | 76.76 | 64.88 |
| VIT_09s0002g01620.t01 | Wine grape | cytosol | 83.8 | 61.66 |
| PGSC0003DMT400069184 | Potato | cytosol | 80.28 | 61.62 |
| PGSC0003DMT400075242 | Potato | cytosol | 79.58 | 61.08 |
| VIT_16s0098g00730.t01 | Wine grape | cytosol | 82.39 | 60.62 |
| KRH64280 | Soybean | nucleus | 81.69 | 60.42 |
| KRH53659 | Soybean | nucleus | 80.28 | 59.38 |
| KRH53656 | Soybean | cytosol | 80.28 | 59.38 |
| KRH53658 | Soybean | cytosol | 80.28 | 59.38 |
| PGSC0003DMT400064920 | Potato | cytosol | 80.99 | 59.28 |
| Solyc08g014550.2.1 | Tomato | cytosol, extracellular, nucleus | 80.99 | 59.28 |
| HORVU0Hr1G006020.2 | Barley | cytosol, plastid | 90.85 | 58.9 |
| Solyc06g073310.2.1 | Tomato | nucleus, plastid | 80.28 | 58.76 |
| Solyc12g096700.1.1 | Tomato | nucleus | 80.28 | 58.76 |
| AT1G33140.1 | Thale cress | cytosol | 77.46 | 56.7 |
| AT1G33120.1 | Thale cress | cytosol | 77.46 | 56.7 |
| CDY32946 | Canola | cytosol, extracellular | 77.46 | 56.7 |
| Bra039999.1-P | Field mustard | cytosol | 77.46 | 56.7 |
| CDX87811 | Canola | cytosol, extracellular | 77.46 | 56.7 |
| CDX93796 | Canola | cytosol | 77.46 | 56.7 |
| CDX96888 | Canola | cytosol | 76.76 | 56.19 |
| Bra033171.1-P | Field mustard | cytosol | 76.76 | 56.19 |
| Bra035980.1-P | Field mustard | cytosol | 76.76 | 56.19 |
| Bra037917.1-P | Field mustard | cytosol | 76.76 | 56.19 |
| CDY14882 | Canola | cytosol | 76.76 | 56.19 |
| CDY25258 | Canola | cytosol, plasma membrane | 76.76 | 56.19 |
| CDX99541 | Canola | cytosol | 76.76 | 55.9 |
| CDX86863 | Canola | cytosol | 76.76 | 55.9 |
| CDX94253 | Canola | cytosol | 76.06 | 55.67 |
| AT4G10450.1 | Thale cress | cytosol | 76.06 | 55.67 |
| HORVU3Hr1G001140.5 | Barley | plastid | 90.85 | 55.13 |
| KRH30764 | Soybean | cytosol | 35.92 | 54.84 |
| KRH64273 | Soybean | endoplasmic reticulum, nucleus | 64.79 | 49.2 |
| Solyc06g034380.1.1 | Tomato | cytosol | 45.07 | 48.48 |
| TraesCS7D01G016500.2 | Wheat | nucleus | 90.14 | 48.3 |
| Solyc12g017290.1.1 | Tomato | cytosol | 38.03 | 41.86 |
| HORVU7Hr1G043940.1 | Barley | cytosol | 26.76 | 41.76 |
| HORVU2Hr1G058720.1 | Barley | cytosol | 25.35 | 39.56 |
| CDY07742 | Canola | cytosol | 5.63 | 13.33 |
| Bra000049.1-P | Field mustard | cytosol | 5.63 | 13.33 |
Protein Annotations
| MapMan:17.1.2.1.8 | Gene3D:3.90.930.12 | UniProt:A0A1Z5RK78 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019843 | InterPro:IPR036789 | EnsemblPlants:OQU84143 | ProteinID:OQU84143 |
| ProteinID:OQU84143.1 | PFAM:PF00347 | PIRSF:PIRSF002162 | ScanProsite:PS00700 | PANTHER:PTHR11655 | PANTHER:PTHR11655:SF24 |
| InterPro:Ribosomal_L6 | InterPro:Ribosomal_L6_CS2 | InterPro:Ribosomal_L6_a/b-dom | InterPro:Ribosomal_L6_a/b-dom_sf | EnsemblPlantsGene:SORBI_3004G003000 | SUPFAM:SSF56053 |
| UniParc:UPI000B8BA054 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:219033..225272
Molecular Weight (calculated)
16103.6 Da
IEP (calculated)
10.363
GRAVY (calculated)
-0.311
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: DGGRKLKVDA WFGTHRTMAA IRTAISHVQN LITTVTKGFR YKMRFVYAHF PINASITNAN TAIEIRNFLG EKKVRKVDML EGVTILRSEK VKDELILDGN
101: DIELVSRSAA LINQKCHVKK KDIRKFLDGI YVSDKGPISE EQ
101: DIELVSRSAA LINQKCHVKK KDIRKFLDGI YVSDKGPISE EQ
001: MKTILSSETM DIPDSVTIKV HAKVIEVEGP RGKLVRDFKH LNLDFQLIKD PETGKKKLKI DSWFGTRKTS ASIRTALSHV DNLISGVTRG FRYKMRFVYA
101: HFPINASIGG DGKSIEIRNF LGEKKVRKVE MLDGVTIVRS EKVKDEIVLD GNDIELVSRS CALINQKCHV KKKDIRKFLD GIYVSEKSKI VEEE
101: HFPINASIGG DGKSIEIRNF LGEKKVRKVE MLDGVTIVRS EKVKDEIVLD GNDIELVSRS CALINQKCHV KKKDIRKFLD GIYVSEKSKI VEEE
Arabidopsis Description
RPL9C60S ribosomal protein L9-1 [Source:UniProtKB/Swiss-Prot;Acc:P49209]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.