Factsheet for Bra011320.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75218	Canola	cytosol	98.34	97.93
Bra023964.1-P	Field mustard	nucleus	75.07	74.55
KRG84467	Soybean	cytosol	12.74	70.77
AT4G32070.1	Thale cress	nucleus	76.59	70.72
Bra007805.1-P	Field mustard	nucleus	71.05	67.95
Bra000549.1-P	Field mustard	nucleus	67.59	63.79
KRH05201	Soybean	cytosol	26.45	63.46
Solyc08g029190.2.1	Tomato	nucleus	53.88	58.15
PGSC0003DMT400049152	Potato	cytosol	53.32	57.63
PGSC0003DMT400038437	Potato	cytosol	53.32	57.63
PGSC0003DMT400067142	Potato	cytosol	54.16	57.08
Solyc06g065910.2.1	Tomato	cytosol	54.02	56.93
VIT_04s0008g06310.t01	Wine grape	mitochondrion	57.2	54.99
KRH61724	Soybean	cytosol	54.71	54.41
Os09t0556200-00	Rice	cytosol, plasma membrane	49.72	52.33
GSMUA_Achr7P05370_001	Banana	cytosol	46.68	51.69
GSMUA_Achr4P20360_001	Banana	cytosol	47.65	51.34
GSMUA_Achr3P00890_001	Banana	cytosol	47.51	51.04
GSMUA_Achr4P04120_001	Banana	cytosol	35.87	50.59
Zm00001d021400_P001	Maize	cytosol	48.06	50.51
KRH52396	Soybean	cytosol	7.2	50.49
EER97166	Sorghum	cytosol	47.78	49.86
TraesCS5D01G366100.1	Wheat	cytosol	47.09	48.92
TraesCS5A01G357000.1	Wheat	cytosol	47.09	48.92
TraesCS5B01G359500.1	Wheat	cytosol	46.68	48.35
HORVU5Hr1G088290.2	Barley	cytosol	46.54	48.21
GSMUA_Achr9P22500_001	Banana	cytosol	44.32	46.44
Os08t0296900-01	Rice	cytosol	48.34	45.09
KRH05202	Soybean	cytosol	21.33	44.25
Zm00001d024424_P001	Maize	cytosol	45.29	44.13
EES13437	Sorghum	cytosol	44.32	43.07
Zm00001d037923_P001	Maize	cytosol	8.59	38.27
Bra006557.1-P	Field mustard	cytosol	32.96	35.79
EER96429	Sorghum	plastid	44.74	34.77
Zm00001d019666_P001	Maize	plastid	43.49	33.87
TraesCS5B01G160600.1	Wheat	cytosol	42.94	33.16
TraesCS5D01G168200.1	Wheat	cytosol	42.94	33.16
TraesCS5A01G163200.1	Wheat	cytosol	42.8	33.05
HORVU5Hr1G050890.1	Barley	cytosol	42.52	32.73
Bra019727.1-P	Field mustard	cytosol	35.04	29.73
TraesCS5D01G165100.1	Wheat	cytosol	13.71	25.71
HORVU5Hr1G050130.1	Barley	cytosol	12.74	23.17
TraesCS5B01G157700.1	Wheat	cytosol	13.16	22.41
TraesCS5A01G160000.1	Wheat	cytosol	12.05	21.97

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EnsemblPlantsGene:Bra011320	EnsemblPlants:Bra011320.1	EnsemblPlants:Bra011320.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	UniProt:M4D4B6	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50293	PFscan:PS51745
PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002546621	SEG:seg	:

Description

AT2G25290 (E=2e-287) | binding

Coordinates

chrA01:+:2740739..2742983

Molecular Weight (calculated)

81714.4 Da

IEP (calculated)

5.228

GRAVY (calculated)

-0.517

Length

722 amino acids

Sequence
(BLAST)

001: MGKPTAKKTP KDAPGGGAKS GKTNHRSASR AFDEDMEIFI NRAAELKEEG NKLFQKRDNE GAMLCYDKAV KLLPKDHIDV AYLRTSMASC YMQMGLGEYP
101: NAISECNSAL EASPRYSRAL LRRARCYEAL NKLDYAFRDE RIVLNMEPEN VNANEVFDRV KKALVDKGVD VEEMEQSFVD VMPLGTARLK KVVKKSKKKK
201: KEDEVKGNRA VVESPKAIIA ETKEEKKRTT FKKQKKKSGN KGGDEKVVVM DKEVIASEIV EGGKEETTVT RTVKLVHGDD IRWAQLPLDS SIRLVRDVIK
301: DRFPALKGFL IKYKDTEGDL VTITTSDELK LAASNHDKLA SLRLYIAEAS PDQEPSYDGA EKDVKRVSSV ADSGSVGESS CFENWIFQFA QLFKNHVGFD
401: SDSYLDLHDL GMKLYTEAME DAVTGEEAQV LFEIAADKFQ EMAALAMFNW GNVHMSKARK QVSFPEDASR EAVIEAVEAA FVWTRNEYNK AAKRYEEAVK
501: IKPDFYEALI ALGQEQFEQA KLLWYHALKG KVDIESEVSQ EVLMLYNKAE DSMERGMQIW EEMEERRLNG ISKLDMQRAL LHKMQLDGWC REGADEETVE
601: QTANMSSQIN LLWGSILYER SIVEYKLGLT TWEECLEVAV EKFELAGASA TDIAVMVKNH CSSESALEGM GVKIDEIVQA WNEMYDAKRW QMGVPSFRLE
701: PMFRRKAPKL HDILENVFSE SA

Best Arabidopsis Sequence Match ( AT4G32070.1 )
(BLAST)

001: MGKPTAKKKN PETPKDASGG GGGGGGKSGK TYHRSTSRVF DEDMEIFISR ALELKEEGNK LFQKRDHEGA MLSFDKALKL LPKDHIDVAY LRTSMASCYM
101: QMGLGEYPNA ISECNLALEA SPRYSKALVR RSRCYEALNK LDYAFRDARI VLNMEPGNVS ANEIFDRVKK VLVDKGIDVD EMEKDFVDVQ PVCAARLKKI
201: VKERLRKSKK KKKSGGKDEE LKSPKVVVVD KGDEAEGRNK PKEEKSDKSD IDGKIGGKRE EKKTSFKSDK GQKKKSGGNK AGEERKVEDK VVVMDKEVIA
301: SEIVDGGGSK KEGATVTRTI KLVHGDDIRW AQLPLDSTVR LVRDVIRDRF PALRGFLIKY RDTEGDLVTI TTTDELRLAA STHDKLGSLR LYIAEVNPDQ
401: EPTYDGMSNT ESTDKVSKRL SSLADNGSVG EYVGSDKASG CFENWIFQFA QLFKNHVGFD SDSYVDLHDL GMKLYTEAME DAVTGEDAQE LFQIAADKFQ
501: EMGALALLNW GNVHMSKARK QVCIPEDASR EAIIEAVEAA FVWTQNEYNK AAEKYEEAIK VKPDFYEALL ALGQEQFEHA KLCWYHALKS KVDLESEASQ
601: EVLKLYNKAE DSMERGMQIW EEMEECRLNG ISKLDKHKNM LRKLELDELF SEASEEETVE QTANMSSQIN LLWGSLLYER SIVEYKLGLP TWDECLEVAV
701: EKFELAGASA TDIAVMVKNH CSSESALEGM GFKIDEIVQA WNEMYDAKRW QMGVPSFRLE PMFRRRAPKL HDILENVFSG PV

Arabidopsis Description

Phox4Protein PHOX4 [Source:UniProtKB/Swiss-Prot;Acc:F4JTI1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.