Factsheet for GSMUA_Achr9P22500_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P08110_001
GSMUA_Achr6P25560_001
GSMUA_Achr9P08680_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	GSMUA_Achr10P...	AT4G09570.1	19130088
AT4G32070.1	GSMUA_Achr2P08110_001	AT4G09570.1	19130088
AT4G32070.1	GSMUA_Achr6P25560_001	AT4G09570.1	19130088
AT4G32070.1	GSMUA_Achr9P08680_001	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P05370_001	Banana	cytosol	59.8	63.19
GSMUA_Achr4P20360_001	Banana	cytosol	60.96	62.69
GSMUA_Achr3P00890_001	Banana	cytosol	60.81	62.35
GSMUA_Achr4P04120_001	Banana	cytosol	43.69	58.79
KRG84467	Soybean	cytosol	10.74	56.92
Zm00001d021400_P001	Maize	cytosol	55.01	55.17
EER97166	Sorghum	cytosol	55.15	54.91
Os09t0556200-00	Rice	cytosol, plasma membrane	54.57	54.81
VIT_11s0118g00490.t01	Wine grape	cytosol	53.41	54.28
TraesCS5A01G357000.1	Wheat	cytosol	54.57	54.1
TraesCS5D01G366100.1	Wheat	cytosol	54.43	53.96
HORVU5Hr1G088290.2	Barley	cytosol	54.28	53.66
TraesCS5B01G359500.1	Wheat	cytosol	54.28	53.66
KRH05201	Soybean	cytosol	22.79	52.16
Solyc08g029190.2.1	Tomato	nucleus	50.36	51.87
PGSC0003DMT400038437	Potato	cytosol	49.2	50.75
PGSC0003DMT400049152	Potato	cytosol	49.2	50.75
PGSC0003DMT400067142	Potato	cytosol	49.78	50.07
Solyc06g065910.2.1	Tomato	cytosol	49.78	50.07
VIT_04s0008g06310.t01	Wine grape	mitochondrion	54.14	49.67
KRH37816	Soybean	cytosol	50.8	47.95
KRH20222	Soybean	nucleus	50.22	47.79
KRH03587	Soybean	nucleus	49.93	47.45
CDY38510	Canola	nucleus	47.46	46.98
CDX68815	Canola	cytosol, nucleus, plastid	46.44	46.85
Solyc07g007390.2.1	Tomato	nucleus	52.54	46.53
CDY11535	Canola	nucleus	47.61	46.46
CDY58928	Canola	cytosol	47.02	46.35
KRH61724	Soybean	cytosol	48.19	45.73
CDX83226	Canola	cytosol	47.75	45.69
AT2G25290.4	Thale cress	cytosol	48.48	44.83
CDX75218	Canola	cytosol	47.17	44.83
PGSC0003DMT400078952	Potato	cytosol	52.39	44.51
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	46.44	44.32
Bra007805.1-P	Field mustard	nucleus	48.33	44.11
Zm00001d024424_P001	Maize	cytosol	47.02	43.72
KRH52396	Soybean	cytosol	6.53	43.69
EES13437	Sorghum	cytosol	46.3	42.93
CDX72344	Canola	nucleus	43.69	42.88
Bra000549.1-P	Field mustard	nucleus	47.61	42.88
Bra023964.1-P	Field mustard	nucleus	44.41	42.09
CDY13473	Canola	nucleus	43.98	41.91
Os08t0296900-01	Rice	cytosol	46.88	41.73
AT4G32070.1	Thale cress	nucleus	46.73	41.18
CDX70924	Canola	cytosol	34.4	37.21
CDY51850	Canola	cytosol	34.25	37.11
Zm00001d037923_P001	Maize	cytosol	8.71	37.04
KRH05202	Soybean	cytosol	18.43	36.49
TraesCS5B01G160600.1	Wheat	cytosol	49.2	36.26
TraesCS5D01G168200.1	Wheat	cytosol	49.2	36.26
TraesCS5A01G163200.1	Wheat	cytosol	48.91	36.04
Bra006557.1-P	Field mustard	cytosol	34.69	35.94
EER96429	Sorghum	plastid	48.33	35.84
GSMUA_Achr1P18260_001	Banana	nucleus	36.57	35.69
Zm00001d019666_P001	Maize	plastid	47.31	35.17
HORVU5Hr1G050890.1	Barley	cytosol	47.75	35.07
AT5G20360.1	Thale cress	cytosol	38.9	33.13
TraesCS5D01G165100.1	Wheat	cytosol	14.8	26.49
HORVU5Hr1G050130.1	Barley	cytosol	14.8	25.69
TraesCS5A01G160000.1	Wheat	cytosol	14.22	24.75
TraesCS5B01G157700.1	Wheat	cytosol	14.95	24.29

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr9G22500_001	EnsemblPlants:GSMUA_Achr9P22500_001	EnsemblPlants:GSMUA_Achr9T22500_001	InterPro:IPR000270	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	UniProt:M0U2K9	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452
SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002965188	SEG:seg

Description

octicosapeptide/Phox/Bem1p, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G22500_001]

Coordinates

chr9:-:27598158..27601563

Molecular Weight (calculated)

79496.9 Da

IEP (calculated)

6.989

GRAVY (calculated)

-0.631

Length

689 amino acids

Sequence
(BLAST)

001: MSRFRLRGVE SFGRQEEGEP RGKKKKNSGG KNGTESKHPR SNEHNPKVFG EGTTIFLDMA HDMKEEGNKL FQKRDYEGAL LKYENAIKLF PKNHANTAYL
101: HSNIATCYMQ MEPKQYHRAI KECNLALEAS PKYSKALLKR ARCLEALSRL DLACKDVDVV LNLEPNNITA LEISERVKKV MEKKGFVLDD NADLSLTEVV
201: AVKEKLKKKK KKKKKKKRSH KAEEKVITEE KHIDVKEQPM WVVKLVFAED IRWAQIPANC SMLRLRETVG RKFPSLKAIL IKYRDREGDL VTITTSEELT
301: WARQSAEPQG SVRLYLTEVS PECAPWFEDA ETNSSSTVQG TNHNVAAEYH SIMNDEEKSS PSYVDDWIIQ FAHLFKNYLG FSSDSYVNLR ELGMKLSSEA
401: IEDTITSEEA QEIFELAEGN FQDMAALALF NWGNIHLSRA RKKLFLSEDA SKESIHEKMK DSYEWAQDEY IKAGKRYKDA LKIKPDFYEG FLALGLQQFE
501: RAKLSWCHVL GSKVDLEAWP SEKLIELYNN AEDNMEKGTN MWEKMEEQRI KELSELKDDK SLLEKMGLDG FFKDLSMDET AEQAANMRSQ INRIWGTILY
601: ERSVMEFKLG IPIWEEFLVA AVEKFKLAGV SPVDIAVITK NHCANRTSQE GSTFMIEEIV QAWHETHDDK RWMIGVPSFR LEQLFRRRV

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.