Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG84467 | Soybean | cytosol | 13.48 | 53.08 |
| KRH05201 | Soybean | cytosol | 30.66 | 52.16 |
| GSMUA_Achr4P20360_001 | Banana | cytosol | 63.28 | 48.36 |
| GSMUA_Achr3P00890_001 | Banana | cytosol | 59.96 | 45.68 |
| GSMUA_Achr7P05370_001 | Banana | cytosol | 57.62 | 45.25 |
| Os09t0556200-00 | Rice | cytosol, plasma membrane | 59.96 | 44.75 |
| TraesCS5A01G357000.1 | Wheat | cytosol | 59.96 | 44.17 |
| Zm00001d021400_P001 | Maize | cytosol | 58.98 | 43.96 |
| HORVU5Hr1G088290.2 | Barley | cytosol | 59.77 | 43.9 |
| TraesCS5D01G366100.1 | Wheat | cytosol | 59.57 | 43.88 |
| EER97166 | Sorghum | cytosol | 59.18 | 43.79 |
| TraesCS5B01G359500.1 | Wheat | cytosol | 59.57 | 43.76 |
| GSMUA_Achr9P22500_001 | Banana | cytosol | 58.79 | 43.69 |
| VIT_11s0118g00490.t01 | Wine grape | cytosol | 53.52 | 40.41 |
| PGSC0003DMT400038437 | Potato | cytosol | 50.78 | 38.92 |
| PGSC0003DMT400049152 | Potato | cytosol | 50.78 | 38.92 |
| Zm00001d037923_P001 | Maize | cytosol | 12.3 | 38.89 |
| Solyc08g029190.2.1 | Tomato | nucleus | 50.0 | 38.27 |
| Solyc06g065910.2.1 | Tomato | cytosol | 51.17 | 38.25 |
| CDX68815 | Canola | cytosol, nucleus, plastid | 50.59 | 37.92 |
| PGSC0003DMT400067142 | Potato | cytosol | 50.2 | 37.52 |
| VIT_04s0008g06310.t01 | Wine grape | mitochondrion | 54.49 | 37.15 |
| CDY58928 | Canola | cytosol | 49.8 | 36.48 |
| CDY11535 | Canola | nucleus | 50.2 | 36.4 |
| CDY38510 | Canola | nucleus | 49.22 | 36.21 |
| Bra011320.1-P | Field mustard | cytosol, nucleus, plastid | 50.59 | 35.87 |
| CDX75218 | Canola | cytosol | 50.59 | 35.72 |
| CDX83226 | Canola | cytosol | 49.22 | 35.0 |
| CDY13473 | Canola | nucleus | 49.41 | 34.99 |
| CDX72344 | Canola | nucleus | 47.66 | 34.76 |
| EES13437 | Sorghum | cytosol | 50.39 | 34.72 |
| Os08t0296900-01 | Rice | cytosol | 52.34 | 34.63 |
| Zm00001d024424_P001 | Maize | cytosol | 50.0 | 34.55 |
| Bra023964.1-P | Field mustard | nucleus | 49.02 | 34.53 |
| Solyc07g007390.2.1 | Tomato | nucleus | 52.15 | 34.32 |
| Bra007805.1-P | Field mustard | nucleus | 50.59 | 34.3 |
| KRH37816 | Soybean | cytosol | 48.83 | 34.25 |
| AT2G25290.4 | Thale cress | cytosol | 49.8 | 34.23 |
| KRH03587 | Soybean | nucleus | 48.24 | 34.07 |
| KRH20222 | Soybean | nucleus | 48.05 | 33.98 |
| KRH61724 | Soybean | cytosol | 47.66 | 33.61 |
| Bra000549.1-P | Field mustard | nucleus | 49.61 | 33.2 |
| PGSC0003DMT400078952 | Potato | cytosol | 52.34 | 33.05 |
| AT4G32070.1 | Thale cress | nucleus | 49.02 | 32.1 |
| CDY51850 | Canola | cytosol | 35.94 | 28.93 |
| CDX70924 | Canola | cytosol | 35.74 | 28.73 |
| Bra006557.1-P | Field mustard | cytosol | 35.94 | 27.67 |
| TraesCS5B01G160600.1 | Wheat | cytosol | 49.41 | 27.06 |
| TraesCS5D01G168200.1 | Wheat | cytosol | 49.41 | 27.06 |
| TraesCS5A01G163200.1 | Wheat | cytosol | 49.41 | 27.06 |
| EER96429 | Sorghum | plastid | 48.44 | 26.7 |
| HORVU5Hr1G050890.1 | Barley | cytosol | 48.83 | 26.65 |
| Zm00001d019666_P001 | Maize | plastid | 47.27 | 26.11 |
| GSMUA_Achr1P18260_001 | Banana | nucleus | 35.16 | 25.5 |
| AT5G20360.1 | Thale cress | cytosol | 36.72 | 23.24 |
| KRH05202 | Soybean | cytosol | 8.2 | 12.07 |
| TraesCS5B01G157700.1 | Wheat | cytosol | 7.81 | 9.43 |
| TraesCS5A01G160000.1 | Wheat | cytosol | 6.64 | 8.59 |
| TraesCS5D01G165100.1 | Wheat | cytosol | 6.45 | 8.57 |
| HORVU5Hr1G050130.1 | Barley | cytosol | 6.05 | 7.81 |
| KRH52396 | Soybean | cytosol | 1.56 | 7.77 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P04120_001 | EnsemblPlants:GSMUA_Achr4T04120_001 | EnsemblPlantsGene:GSMUA_Achr4G04120_001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR000270 | InterPro:PB1_dom | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF419 | PFAM:PF00564 |
| PFscan:PS51745 | SEG:seg | SMART:SM00666 | SUPFAM:SSF54277 | UniParc:UPI0002960EAC | UniProt:M0SKX9 |
| MapMan:20.2.4.5 | : | : | : | : | : |
Description
octicosapeptide/Phox/Bem1p, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G04120_001]
Coordinates
chr4:+:3300237..3304251
Molecular Weight (calculated)
58497.7 Da
IEP (calculated)
4.959
GRAVY (calculated)
-0.501
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKDIISDD SAVVSLQEVV ILKERSKKKK KKKSRKAQEK AMTEKHVEVK EEPIRVVKLV LGDDIRWAQI PADCSMIHLR ETVGKKFPNL KAILIKYKDK
101: EDDLVTITTS EELRWAEESA DPQGSLRLYL TEVSPENEPW LADIETSSSL KGQGRNYVDI SENGSGNSDE KSLSTYIDDW IVQFAQLFKN QLGFSSDAYL
201: NLHELGIKLY SEAIEDTVTS EEAQEILKLA EGKFQEMVAL ALFNWGNVHM SRARKKLFLS EDASKESVLE RVKEAYKWAH AEYIKAGKRY EEALKTNPDF
301: YEGHFALAQQ QFEQAKLSWY YAIGSNIDLD VWPSAEVFGL FNDAEYNMEK GTEMWEKMEE LQLKELTQPR ELRGLLEKMG MNGYFKELPT EAATEQTSNM
401: RSQINMLWGS MLSERSAVEF KLGLPTWEGC LMAAVEKLKL AGVSSANVAV IIRNHCANAT AQEGFSLKID EVVQAWNEMY DAKRGMDGLP SFRLEPLFHQ
501: KAPNLYRMME NI
101: EDDLVTITTS EELRWAEESA DPQGSLRLYL TEVSPENEPW LADIETSSSL KGQGRNYVDI SENGSGNSDE KSLSTYIDDW IVQFAQLFKN QLGFSSDAYL
201: NLHELGIKLY SEAIEDTVTS EEAQEILKLA EGKFQEMVAL ALFNWGNVHM SRARKKLFLS EDASKESVLE RVKEAYKWAH AEYIKAGKRY EEALKTNPDF
301: YEGHFALAQQ QFEQAKLSWY YAIGSNIDLD VWPSAEVFGL FNDAEYNMEK GTEMWEKMEE LQLKELTQPR ELRGLLEKMG MNGYFKELPT EAATEQTSNM
401: RSQINMLWGS MLSERSAVEF KLGLPTWEGC LMAAVEKLKL AGVSSANVAV IIRNHCANAT AQEGFSLKID EVVQAWNEMY DAKRGMDGLP SFRLEPLFHQ
501: KAPNLYRMME NI
001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ
Arabidopsis Description
Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.