CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03587	Soybean	nucleus	72.88	73.38
KRH20222	Soybean	nucleus	72.05	72.65
KRG84467	Soybean	cytosol	11.64	65.38
VIT_11s0118g00490.t01	Wine grape	cytosol	59.86	64.45
KRH05201	Soybean	cytosol	24.11	58.47
Solyc07g007390.2.1	Tomato	nucleus	58.63	55.01
GSMUA_Achr3P00890_001	Banana	cytosol	50.55	54.91
GSMUA_Achr4P20360_001	Banana	cytosol	50.14	54.63
GSMUA_Achr7P05370_001	Banana	cytosol	47.81	53.53
PGSC0003DMT400078952	Potato	cytosol	58.63	52.77
Os09t0556200-00	Rice	cytosol, plasma membrane	48.22	51.31
EER97166	Sorghum	cytosol	48.36	51.01
Zm00001d021400_P001	Maize	cytosol	47.95	50.95
GSMUA_Achr9P22500_001	Banana	cytosol	47.95	50.8
TraesCS5D01G366100.1	Wheat	cytosol	47.53	49.93
TraesCS5A01G357000.1	Wheat	cytosol	47.26	49.64
TraesCS5B01G359500.1	Wheat	cytosol	47.26	49.5
HORVU5Hr1G088290.2	Barley	cytosol	47.12	49.35
KRH61724	Soybean	cytosol	48.9	49.17
GSMUA_Achr4P04120_001	Banana	cytosol	34.25	48.83
KRH52396	Soybean	cytosol	6.58	46.6
CDY51850	Canola	cytosol	38.36	44.03
Bra006557.1-P	Field mustard	cytosol	38.9	42.71
CDX70924	Canola	cytosol	37.26	42.7
EES13437	Sorghum	cytosol	42.74	41.99
KRH05202	Soybean	cytosol	20.0	41.95
Os08t0296900-01	Rice	cytosol	44.11	41.6
Zm00001d024424_P001	Maize	cytosol	41.64	41.03
Zm00001d037923_P001	Maize	cytosol	9.04	40.74
AT5G20360.1	Thale cress	cytosol	42.05	37.95
EER96429	Sorghum	plastid	43.7	34.34
TraesCS5D01G168200.1	Wheat	cytosol	43.97	34.33
TraesCS5B01G160600.1	Wheat	cytosol	43.7	34.12
TraesCS5A01G163200.1	Wheat	cytosol	43.56	34.01
Zm00001d019666_P001	Maize	plastid	43.15	33.98
KRH02008	Soybean	nucleus	35.89	33.76
HORVU5Hr1G050890.1	Barley	cytosol	43.01	33.48
KRH51148	Soybean	cytosol	34.52	32.77
TraesCS5D01G165100.1	Wheat	cytosol	13.01	24.68
TraesCS5B01G157700.1	Wheat	cytosol	13.97	24.06
TraesCS5A01G160000.1	Wheat	cytosol	12.88	23.74
HORVU5Hr1G050130.1	Barley	cytosol	12.74	23.43

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100820306	MapMan:20.2.4.5	Gene3D:3.10.20.90	EMBL:ACUP02005517	ncoils:Coil
EnsemblPlantsGene:GLYMA_09G091200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1L282	InterPro:IPR000270
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	ProteinID:KRH37814.1	ProteinID:KRH37815.1	EnsemblPlants:KRH37816
ProteinID:KRH37816	ProteinID:KRH37816.1	ProteinID:KRH37817.1	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50005
PFscan:PS50293	PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF392	SMART:SM00028	SMART:SM00666
SUPFAM:SSF48452	SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000233D4D1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:12285911..12291448

Molecular Weight (calculated)

83250.2 Da

IEP (calculated)

5.576

GRAVY (calculated)

-0.582

Length

730 amino acids

Sequence
(BLAST)

001: MGKKKKQVGE TSEDRGNHKK VEDKSPNSYD NDTLAFISMA QELKDEGNKF FQKRDAEGAL VKYEKALKLL PRNHVDVSYL RSNMAACYMQ MGLGEYPRAI
101: RECNLALEVS PKYSKALMKR ARCHEALNRL DLALKDLSAV LKIEPNNIMA LEVLGKVKHA LEDRGLIVND TEIELPPDYV EPPALPLEKV VKQKTHKKKR
201: NKEKVKASDK IEEKQAEEKL EEKKSEDSIV IKKAGGSLKE KKANKSKKKA KERIDEKKDD VKEVIEEKSN GRSEDIPKKT AKLIFGEDIR WAELPLNCSL
301: LQLREVICDR FPRLGAVLVK YRDQEGDLVT ITSDEELRWA ETGSQGSIRL YIVEANPDHD PLFEKFNVKN GEKVNTYSSP VNGSVVKAKD IISSSCIEDW
401: IILFAQLFKN NVGFESDRYL DFHEFGMKLY SEAVEETITS DEAQGIFDIA GGKFQEMAAL ALFNWGNVHM SRARKKVYFT EDSSKEHMHE QIKSSYEWAQ
501: KEYAKAGEKY ETAIDIKPDF YEGFLALGQQ QFEQAKLSWD YALCSNVDLA TWPSTEVLQL YNSAEENMEK GMLIWEESGG QQLSEIFDPK DIGLHLQNMG
601: LDGLFKNMSS DEIAAQVENM KSQINLLWGT MLYELSIVEF KLGLPVWHES LEDAAEKFEL AGASATDIAV MLKNHCSNNT DGLGFKIDEI VQAWNEMYEA
701: KKWQKGVSSF RLEPLFRRRI SKVYHAFELV

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.