Factsheet for Zm00001d037923_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004812_P002
Zm00001d023560_P002
Zm00001d053016_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	Zm00001d004812_P002	AT4G09570.1	19130088
AT4G32070.1	Zm00001d023560_P002	AT4G09570.1	19130088
AT4G32070.1	Zm00001d053016_P002	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG84467	Soybean	cytosol	40.74	50.77
Zm00001d021400_P001	Maize	cytosol	61.11	14.41
EER97166	Sorghum	cytosol	61.11	14.31
Os09t0556200-00	Rice	cytosol, plasma membrane	59.88	14.14
TraesCS5A01G357000.1	Wheat	cytosol	58.64	13.67
TraesCS5B01G359500.1	Wheat	cytosol	58.64	13.63
HORVU5Hr1G088290.2	Barley	cytosol	58.64	13.63
TraesCS5D01G366100.1	Wheat	cytosol	58.02	13.53
KRH05201	Soybean	cytosol	24.69	13.29
GSMUA_Achr4P04120_001	Banana	cytosol	38.89	12.3
GSMUA_Achr4P20360_001	Banana	cytosol	46.91	11.34
GSMUA_Achr3P00890_001	Banana	cytosol	44.44	10.71
GSMUA_Achr7P05370_001	Banana	cytosol	40.12	9.97
PGSC0003DMT400049152	Potato	cytosol	40.12	9.73
PGSC0003DMT400038437	Potato	cytosol	40.12	9.73
Solyc08g029190.2.1	Tomato	nucleus	40.12	9.72
CDY58928	Canola	cytosol	40.74	9.44
CDY11535	Canola	nucleus	40.74	9.35
Zm00001d024424_P001	Maize	cytosol	42.59	9.31
PGSC0003DMT400067142	Potato	cytosol	38.89	9.2
Solyc06g065910.2.1	Tomato	cytosol	38.89	9.2
CDY38510	Canola	nucleus	39.51	9.2
CDX68815	Canola	cytosol, nucleus, plastid	38.27	9.08
KRH37816	Soybean	cytosol	40.74	9.04
VIT_11s0118g00490.t01	Wine grape	cytosol	37.65	9.0
KRH61724	Soybean	cytosol	40.12	8.95
KRH20222	Soybean	nucleus	39.51	8.84
KRH03587	Soybean	nucleus	39.51	8.83
CDX83226	Canola	cytosol	38.89	8.75
Bra007805.1-P	Field mustard	nucleus	40.74	8.74
CDY13473	Canola	nucleus	38.89	8.71
GSMUA_Achr9P22500_001	Banana	cytosol	37.04	8.71
CDX72344	Canola	nucleus	37.65	8.69
Bra023964.1-P	Field mustard	nucleus	38.89	8.67
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	38.27	8.59
CDX75218	Canola	cytosol	38.27	8.55
VIT_04s0008g06310.t01	Wine grape	mitochondrion	39.51	8.52
Solyc07g007390.2.1	Tomato	nucleus	40.74	8.48
AT2G25290.4	Thale cress	cytosol	38.89	8.46
AT4G32070.1	Thale cress	nucleus	39.51	8.18
Bra000549.1-P	Field mustard	nucleus	38.27	8.1
PGSC0003DMT400078952	Potato	cytosol	38.89	7.77
Zm00001d019666_P001	Maize	plastid	43.83	7.66
CDY51850	Canola	cytosol	20.37	5.19
CDX70924	Canola	cytosol	20.37	5.18
Bra006557.1-P	Field mustard	cytosol	20.37	4.96
AT5G20360.1	Thale cress	cytosol	20.99	4.2
Zm00001d039966_P001	Maize	plastid	19.75	4.1
KRH52396	Soybean	cytosol	2.47	3.88
KRH05202	Soybean	cytosol	1.23	0.57

Protein Annotations

EnsemblPlants:Zm00001d037923_P001	EnsemblPlants:Zm00001d037923_T001	EnsemblPlantsGene:Zm00001d037923	PANTHER:PTHR22904	PANTHER:PTHR22904:SF429	ProteinID:AQK85204.1
UniParc:UPI00084473CF	UniProt:A0A1D6M1T6	MapMan:20.2.4.5	:	:	:

Description

Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein

Coordinates

chr6:+:142037095..142039970

Molecular Weight (calculated)

18173.0 Da

IEP (calculated)

4.674

GRAVY (calculated)

0.115

Length

162 amino acids

Sequence
(BLAST)

001: MGLEEYIKDV STDDAAEQAS NLRFQINILW GMLLYERSVV EFKLGLSMWE DCLMAAIEKF KLGGASATYI AVLVKNHYAN ETAQDGLGFK IDEIVQAWNE
101: MTLIAETEKA ADALQTAAAM NPFAQASLVE ARKLVLVKEV YMKHWYSGKR SIYVLLLTSF CS

Best Arabidopsis Sequence Match ( AT2G25290.1 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.