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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY51850 Canola cytosol 51.92 66.04
CDX70924 Canola cytosol 51.55 65.46
Bra006557.1-P Field mustard cytosol 52.53 63.91
VIT_11s0118g00490.t01 Wine grape cytosol 37.82 45.13
KRH20222 Soybean nucleus 38.94 43.51
KRH03587 Soybean nucleus 38.94 43.45
GSMUA_Achr3P00890_001 Banana cytosol 35.11 42.26
KRH37816 Soybean cytosol 37.95 42.05
GSMUA_Achr7P05370_001 Banana cytosol 33.0 40.95
GSMUA_Achr4P20360_001 Banana cytosol 33.25 40.15
Solyc07g007390.2.1 Tomato nucleus 37.45 38.95
GSMUA_Achr9P22500_001 Banana cytosol 33.13 38.9
EER97166 Sorghum cytosol 32.01 37.43
Zm00001d021400_P001 Maize cytosol 31.77 37.41
Os09t0556200-00 Rice cytosol, plasma membrane 31.27 36.88
PGSC0003DMT400078952 Potato cytosol 36.96 36.87
AT2G25290.4 Thale cress cytosol 33.87 36.78
GSMUA_Achr4P04120_001 Banana cytosol 23.24 36.72
TraesCS5A01G357000.1 Wheat cytosol 30.66 35.68
TraesCS5B01G359500.1 Wheat cytosol 30.66 35.58
TraesCS5D01G366100.1 Wheat cytosol 30.53 35.54
HORVU5Hr1G088290.2 Barley cytosol 30.41 35.29
AT4G32070.1 Thale cress nucleus 33.5 34.65
Os08t0296900-01 Rice cytosol 31.89 33.33
EES13437 Sorghum cytosol 29.91 32.57
Zm00001d024424_P001 Maize cytosol 29.79 32.52
AT1G62390.1 Thale cress plastid 26.95 29.03
EER96429 Sorghum plastid 30.9 26.91
TraesCS5B01G160600.1 Wheat cytosol 30.04 25.99
Zm00001d019666_P001 Maize plastid 29.67 25.89
TraesCS5D01G168200.1 Wheat cytosol 29.91 25.88
TraesCS5A01G163200.1 Wheat cytosol 29.79 25.78
HORVU5Hr1G050890.1 Barley cytosol 29.3 25.27
TraesCS5A01G160000.1 Wheat cytosol 10.88 22.22
TraesCS5D01G165100.1 Wheat cytosol 10.51 22.08
HORVU5Hr1G050130.1 Barley cytosol 10.75 21.91
TraesCS5B01G157700.1 Wheat cytosol 11.25 21.46
Zm00001d037923_P001 Maize cytosol 4.2 20.99
Protein Annotations
Gene3D:1.25.40.10MapMan:20.2.4.5Gene3D:3.10.20.90EntrezGene:832158ProteinID:AED92835.1EMBL:AF296825
ProteinID:ANM71141.1ArrayExpress:AT5G20360EnsemblPlantsGene:AT5G20360RefSeq:AT5G20360TAIR:AT5G20360RefSeq:AT5G20360-TAIR-G
EnsemblPlants:AT5G20360.1TAIR:AT5G20360.1ncoils:CoilUniProt:F4K487GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0008150InterPro:IPR000270InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734
RefSeq:NP_001332690.1RefSeq:NP_197536.1InterPro:PB1_domPFAM:PF00564PO:PO:0000005PO:PO:0000013
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PFscan:PS50005PFscan:PS50293PFscan:PS51745PANTHER:PTHR22904
PANTHER:PTHR22904:SF392Symbol:Phox3SMART:SM00028SMART:SM00666SUPFAM:SSF48452SUPFAM:SSF54277
InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatUniParc:UPI000016252FSEG:seg:
Description
Phox3Protein PHOX3 [Source:UniProtKB/Swiss-Prot;Acc:F4K487]
Coordinates
chr5:-:6881332..6885093
Molecular Weight (calculated)
91526.8 Da
IEP (calculated)
4.697
GRAVY (calculated)
-0.489
Length
809 amino acids
Sequence
(BLAST)
001: MEKQNEEIST DDAETSQSQL VDDSKVETLD DCVSKVETLD DCVSKVETLD DCVSKAETLA DCVSKVETLD DCVSKVKTLD DCVSKVENLD DCVPKVETLD
101: DCVPKVETLD DCVSEVETLD DCVSKAQGLK EEGNKLFQKR DYDGAMFKYG EAIKILPKDH VEVSHVRANV ASCYMQLEPG EFAKAIHECD LALSVTPDHN
201: KALLKRARCY EALNKLDLAL RDVCMVSKLD PKNPMASEIV EKLKRTLESK GLRINNSVIE LPPDYVEPVG ASPAALWAKL GKVRVKKTKK SNQVEEKSEG
301: EGEDVEPEKK NNVLAEKGKE KIKMKVKGKQ SDKRSDTSKE QEKVIIEEEL LVIGVEDVNK DVKFVYSDDI RLAELPINCT LFKLREVVHE RFPSLRAVHI
401: KYRDQEGDLV TITTDEELRM SEVSSRSQGT MRFYVVEVSP EQDPFFGRLV EMKKLKITAD SFKAKVNGRG GCKVEDWMIE FAHLFKIQAR IDSDRCLNLQ
501: ELGMKLNSEA MEEVVTSDAA QGPFDRAAQQ FQEVAARSLL NLGYVHMSGA RKRLSLLQGV SGESVSEQVK TAYECAKKEH ANAKEKYEEA MKIKPECFEV
601: FLALGLQQFE EARLSWYYVL VSHLDLKTWP YADVVQFYQS AESNIKKSME VLENLETGKE SEPSQAGKTD CLTHEKDLGS STQNNPAKEA GRLKSWIDIL
701: LCAVLYERSI MEYKLDQPFW RESLEAAMEK FELAGTCKDD VVEIISEDYV AGNTLRDIRF HMEEIIQIFD EIYEAKHWTN GIPSDQLEEI LKRRAENIFH
801: VPNIAIQRG
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.