Factsheet for AT2G25290.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11535	Canola	nucleus	76.91	81.16
CDY58928	Canola	cytosol	75.97	80.97
Bra007805.1-P	Field mustard	nucleus	80.54	79.47
CDY38510	Canola	nucleus	72.75	77.87
CDX83226	Canola	cytosol	74.5	77.08
Bra000549.1-P	Field mustard	nucleus	78.52	76.47
KRG84467	Soybean	cytosol	12.89	73.85
AT4G32070.1	Thale cress	nucleus	74.77	71.23
KRH05201	Soybean	cytosol	25.91	64.12
Solyc08g029190.2.1	Tomato	nucleus	51.68	57.55
PGSC0003DMT400049152	Potato	cytosol	51.01	56.89
PGSC0003DMT400038437	Potato	cytosol	51.01	56.89
Solyc06g065910.2.1	Tomato	cytosol	52.21	56.79
PGSC0003DMT400067142	Potato	cytosol	51.81	56.35
VIT_04s0008g06310.t01	Wine grape	mitochondrion	55.57	55.13
KRH61724	Soybean	cytosol	53.56	54.96
GSMUA_Achr4P20360_001	Banana	cytosol	47.79	53.13
Os09t0556200-00	Rice	cytosol, plasma membrane	48.19	52.33
GSMUA_Achr3P00890_001	Banana	cytosol	46.85	51.93
Zm00001d021400_P001	Maize	cytosol	47.11	51.09
EER97166	Sorghum	cytosol	47.38	51.01
GSMUA_Achr7P05370_001	Banana	cytosol	44.3	50.61
TraesCS5A01G357000.1	Wheat	cytosol	46.58	49.93
TraesCS5D01G366100.1	Wheat	cytosol	46.58	49.93
GSMUA_Achr4P04120_001	Banana	cytosol	34.23	49.8
HORVU5Hr1G088290.2	Barley	cytosol	46.17	49.35
TraesCS5B01G359500.1	Wheat	cytosol	46.04	49.21
GSMUA_Achr9P22500_001	Banana	cytosol	44.83	48.48
KRH52396	Soybean	cytosol	6.31	45.63
KRH05202	Soybean	cytosol	20.54	43.97
Os08t0296900-01	Rice	cytosol	45.23	43.54
EES13437	Sorghum	cytosol	42.95	43.07
Zm00001d024424_P001	Maize	cytosol	42.82	43.05
Zm00001d037923_P001	Maize	cytosol	8.46	38.89
EER96429	Sorghum	plastid	45.23	36.28
AT1G62390.1	Thale cress	plastid	34.9	34.62
Zm00001d019666_P001	Maize	plastid	42.95	34.52
AT5G20360.1	Thale cress	cytosol	36.78	33.87
TraesCS5D01G168200.1	Wheat	cytosol	41.88	33.37
TraesCS5B01G160600.1	Wheat	cytosol	41.74	33.26
TraesCS5A01G163200.1	Wheat	cytosol	41.61	33.16
HORVU5Hr1G050890.1	Barley	cytosol	41.61	33.05
TraesCS5D01G165100.1	Wheat	cytosol	13.83	26.75
HORVU5Hr1G050130.1	Barley	cytosol	13.29	24.94
TraesCS5A01G160000.1	Wheat	cytosol	12.48	23.48
TraesCS5B01G157700.1	Wheat	cytosol	13.02	22.88

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EntrezGene:817067	UniProt:A0A178VW51	ProteinID:AAD23662.1
ProteinID:AEC07680.1	ProteinID:AEC07681.1	ProteinID:AEC07682.1	ProteinID:ANM61435.1	ArrayExpress:AT2G25290	EnsemblPlantsGene:AT2G25290
RefSeq:AT2G25290	TAIR:AT2G25290	RefSeq:AT2G25290-TAIR-G	EnsemblPlants:AT2G25290.4	Unigene:At.49281	UniProt:F4IRM4
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0016020	GO:GO:0030659	GO:GO:0031410	InterPro:IPR000270
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	RefSeq:NP_001154534.1	RefSeq:NP_001189599.1	RefSeq:NP_001323652.1
RefSeq:NP_180101.4	ProteinID:OAP10600.1	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50005	PFscan:PS50293
PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	Symbol:Phox1	SMART:SM00028	SMART:SM00666
SUPFAM:SSF48452	SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0001A7B009
SEG:seg	:	:	:	:	:

Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]

Coordinates

chr2:-:10765706..10768734

Molecular Weight (calculated)

84226.7 Da

IEP (calculated)

4.821

GRAVY (calculated)

-0.545

Length

745 amino acids

Sequence
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.