Factsheet for Bra000549.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83226	Canola	cytosol	85.36	90.69
CDY38510	Canola	nucleus	80.0	87.93
AT2G25290.4	Thale cress	cytosol	76.47	78.52
Bra007805.1-P	Field mustard	nucleus	77.12	78.15
KRG84467	Soybean	cytosol	12.55	73.85
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	63.79	67.59
Bra023964.1-P	Field mustard	nucleus	61.83	65.06
KRH05201	Soybean	cytosol	24.84	63.12
Solyc08g029190.2.1	Tomato	nucleus	50.98	58.3
PGSC0003DMT400049152	Potato	cytosol	49.93	57.19
PGSC0003DMT400038437	Potato	cytosol	49.93	57.19
Solyc06g065910.2.1	Tomato	cytosol	51.11	57.08
PGSC0003DMT400067142	Potato	cytosol	50.59	56.5
KRH61724	Soybean	cytosol	52.42	55.23
VIT_04s0008g06310.t01	Wine grape	mitochondrion	53.99	54.99
GSMUA_Achr4P20360_001	Banana	cytosol	46.14	52.69
GSMUA_Achr7P05370_001	Banana	cytosol	44.18	51.84
GSMUA_Achr3P00890_001	Banana	cytosol	45.49	51.79
EER97166	Sorghum	cytosol	46.41	51.3
Os09t0556200-00	Rice	cytosol, plasma membrane	45.88	51.17
Zm00001d021400_P001	Maize	cytosol	45.88	51.09
GSMUA_Achr4P04120_001	Banana	cytosol	33.2	49.61
TraesCS5D01G366100.1	Wheat	cytosol	44.84	49.35
HORVU5Hr1G088290.2	Barley	cytosol	44.58	48.92
TraesCS5B01G359500.1	Wheat	cytosol	44.58	48.92
TraesCS5A01G357000.1	Wheat	cytosol	44.44	48.92
GSMUA_Achr9P22500_001	Banana	cytosol	42.88	47.61
KRH52396	Soybean	cytosol	6.27	46.6
KRH05202	Soybean	cytosol	20.0	43.97
Os08t0296900-01	Rice	cytosol	44.05	43.54
Zm00001d024424_P001	Maize	cytosol	41.44	42.78
EES13437	Sorghum	cytosol	41.05	42.26
Bra006557.1-P	Field mustard	cytosol	33.59	38.65
Zm00001d037923_P001	Maize	cytosol	8.1	38.27
EER96429	Sorghum	plastid	42.88	35.31
TraesCS5B01G160600.1	Wheat	cytosol	42.61	34.87
TraesCS5A01G163200.1	Wheat	cytosol	42.48	34.76
TraesCS5D01G168200.1	Wheat	cytosol	42.48	34.76
Zm00001d019666_P001	Maize	plastid	42.09	34.74
HORVU5Hr1G050890.1	Barley	cytosol	41.83	34.12
Bra019727.1-P	Field mustard	cytosol	32.68	29.38
TraesCS5D01G165100.1	Wheat	cytosol	12.81	25.45
HORVU5Hr1G050130.1	Barley	cytosol	12.29	23.68
TraesCS5A01G160000.1	Wheat	cytosol	11.63	22.47
TraesCS5B01G157700.1	Wheat	cytosol	12.29	22.17

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EnsemblPlantsGene:Bra000549	EnsemblPlants:Bra000549.1	EnsemblPlants:Bra000549.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	UniProt:M4C8M1	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50293	PFscan:PS51745
PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00025400AE	SEG:seg	:

Description

AT2G25290 (E=2e-249) | binding

Coordinates

chrA03:-:11707673..11710065

Molecular Weight (calculated)

86669.7 Da

IEP (calculated)

5.071

GRAVY (calculated)

-0.640

Length

765 amino acids

Sequence
(BLAST)

001: MGKPTGKKKN PDTPPTDSSG RGGGGGGNKS GKSLVRSASK ADEDMTIFIN RALELKEEGN KLFQRRDTEG AMLRYDKAVK LLPRDHGDDV AYLRTCMASC
101: YMQMGLGEYP NAINECNLAL EASPKHTKAL LKRARCYEAL NKMDFAFRDS RLVLSMEPEN VSANEIFERV KKVLVAKGID LVELEKSFLH VEPVGAARLR
201: KIVKERLRKK KRKTERKSIE DAAKIEDDKK LEDKVVVEEK KVNAEKDVEG KSNQGIVESS KVEDGDGDSR RKKLEEEKKA TSPVMDKEVI ASEIDPKVTR
301: TVKLVHGDDI RWAQLPLDSC VRLVRDVIKD RYPSLKGFLI KYRDQEGDLV TITTTDELRL AASTREKLGS FRLYVTEVSP NQEPTYEGSM NNEESTGKFA
401: KGSSSVADNG SVGECVESEK ASAGLDHWIF QFAQLFKNHV GFDSDSYLDL HNLGMKLYTE GMEDTVTGED AQELFDIAAD KFQEMAALAL FNWGNIHMSK
501: ARRQIYFPED GSRETILEKV EAGFEWATKE YNKAAEKYEE AVQVKYDFYE AYLALGQQQF EQAKLCWYHA LGNKIDVDSE ASQDVLKLYN KAEESMEKGM
601: QIWEEMEERR LNGISNFDQH KEMLQKLGLD GMFCETSDEE NTEKTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECME VAVEKFELAG ASATDIAVMV
701: KNHCSNENAL EGMGFKIDEI VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.