Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G32070.1 | KRG91803 | AT4G09570.1 | 19130088 |
| AT4G32070.1 | KRH34983 | AT4G09570.1 | 19130088 |
| AT4G32070.1 | KRH34984 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG84467 | Soybean | cytosol | 14.46 | 80.77 |
| KRH52396 | Soybean | cytosol | 10.88 | 76.7 |
| KRH05201 | Soybean | cytosol | 28.51 | 68.77 |
| PGSC0003DMT400038437 | Potato | cytosol | 57.85 | 62.87 |
| PGSC0003DMT400049152 | Potato | cytosol | 57.85 | 62.87 |
| Solyc08g029190.2.1 | Tomato | nucleus | 56.75 | 61.58 |
| VIT_04s0008g06310.t01 | Wine grape | mitochondrion | 61.02 | 58.99 |
| Solyc06g065910.2.1 | Tomato | cytosol | 55.1 | 58.39 |
| PGSC0003DMT400067142 | Potato | cytosol | 54.55 | 57.81 |
| CDX68815 | Canola | cytosol, nucleus, plastid | 53.58 | 56.95 |
| CDY11535 | Canola | nucleus | 55.37 | 56.94 |
| CDY58928 | Canola | cytosol | 54.82 | 56.94 |
| CDY38510 | Canola | nucleus | 54.41 | 56.75 |
| CDX83226 | Canola | cytosol | 54.96 | 55.42 |
| CDX75218 | Canola | cytosol | 54.82 | 54.9 |
| Bra011320.1-P | Field mustard | cytosol, nucleus, plastid | 54.41 | 54.71 |
| GSMUA_Achr4P20360_001 | Banana | cytosol | 50.14 | 54.33 |
| GSMUA_Achr3P00890_001 | Banana | cytosol | 50.14 | 54.17 |
| GSMUA_Achr7P05370_001 | Banana | cytosol | 48.48 | 53.99 |
| CDX72344 | Canola | nucleus | 51.93 | 53.7 |
| AT2G25290.4 | Thale cress | cytosol | 54.96 | 53.56 |
| Bra007805.1-P | Field mustard | nucleus | 55.65 | 53.51 |
| Os09t0556200-00 | Rice | cytosol, plasma membrane | 50.41 | 53.35 |
| Bra023964.1-P | Field mustard | nucleus | 53.31 | 53.23 |
| CDY13473 | Canola | nucleus | 52.48 | 52.7 |
| Bra000549.1-P | Field mustard | nucleus | 55.23 | 52.42 |
| EER97166 | Sorghum | cytosol | 49.72 | 52.17 |
| Zm00001d021400_P001 | Maize | cytosol | 49.31 | 52.11 |
| AT4G32070.1 | Thale cress | nucleus | 54.41 | 50.51 |
| TraesCS5A01G357000.1 | Wheat | cytosol | 48.21 | 50.36 |
| TraesCS5D01G366100.1 | Wheat | cytosol | 48.07 | 50.22 |
| KRH03587 | Soybean | nucleus | 50.0 | 50.07 |
| KRH20222 | Soybean | nucleus | 49.86 | 50.0 |
| TraesCS5B01G359500.1 | Wheat | cytosol | 47.8 | 49.78 |
| HORVU5Hr1G088290.2 | Barley | cytosol | 47.66 | 49.64 |
| KRH05202 | Soybean | cytosol | 23.69 | 49.43 |
| KRH37816 | Soybean | cytosol | 49.17 | 48.9 |
| GSMUA_Achr9P22500_001 | Banana | cytosol | 45.73 | 48.19 |
| GSMUA_Achr4P04120_001 | Banana | cytosol | 33.61 | 47.66 |
| Os08t0296900-01 | Rice | cytosol | 46.42 | 43.54 |
| EES13437 | Sorghum | cytosol | 43.39 | 42.4 |
| Zm00001d024424_P001 | Maize | cytosol | 42.15 | 41.3 |
| Zm00001d037923_P001 | Maize | cytosol | 8.95 | 40.12 |
| EER96429 | Sorghum | plastid | 44.35 | 34.66 |
| Zm00001d019666_P001 | Maize | plastid | 43.25 | 33.87 |
| TraesCS5D01G168200.1 | Wheat | cytosol | 43.53 | 33.8 |
| TraesCS5B01G160600.1 | Wheat | cytosol | 42.98 | 33.37 |
| TraesCS5A01G163200.1 | Wheat | cytosol | 42.84 | 33.26 |
| HORVU5Hr1G050890.1 | Barley | cytosol | 42.29 | 32.73 |
| KRH02008 | Soybean | nucleus | 34.16 | 31.96 |
| KRH51148 | Soybean | cytosol | 33.47 | 31.6 |
| TraesCS5D01G165100.1 | Wheat | cytosol | 14.6 | 27.53 |
| HORVU5Hr1G050130.1 | Barley | cytosol | 14.6 | 26.7 |
| TraesCS5A01G160000.1 | Wheat | cytosol | 13.36 | 24.49 |
| TraesCS5B01G157700.1 | Wheat | cytosol | 13.77 | 23.58 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100805760 | MapMan:20.2.4.5 | Gene3D:3.10.20.90 | EMBL:ACUP02002183 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_04G064900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1JUA6 | InterPro:IPR000270 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | EnsemblPlants:KRH61724 | ProteinID:KRH61724 | ProteinID:KRH61724.1 |
| InterPro:PB1_dom | PFAM:PF00564 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF419 |
| SMART:SM00028 | SMART:SM00666 | SUPFAM:SSF48452 | SUPFAM:SSF54277 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_repeat | UniParc:UPI000233A1F4 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:5387638..5391969
Molecular Weight (calculated)
82212.5 Da
IEP (calculated)
5.121
GRAVY (calculated)
-0.581
Length
726 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKPTGKKKG TVTPGAANSH AKHGKSSKAF DEDTAVFITM SQEFREEGNK LFQKKDHEGA MLKYEKALKL LPNNHIDVAH LRTNMATCYM QLGLGEYPRA
101: IHQCNLALEV SPRYSKALLK RATCYRELNR FDLALRDVQL VLGMEPNNLT ALELLESLGK STEEKGVSVD DKGVAFDATV HHSPAPSSQK LKKKRGKKTE
201: DNKVVAEEKG LSSSVEDKVS CVGDKVVVVE KVSSVEDKQV VSKTIEQGKR VVEPVEEEKT VTITRSVKLV FGEDIRWAEL PVNCSVKLVR DIARDRYPGL
301: KGALVKYKDK EGDLVTITTT DELRLAEKSA PEKASFRLYI TEVSPDQEPS YDGNGTTNGD EVRRGDGKPS DGAENGDMEE GKDKDVVKRM VTVEDWLLQF
401: ARMFKNHVGF ESDSYLDTHE YAMKLYEEAI EDSVASNDAQ ELFRMAADKF QEMAALALFN WGSVQMSLAR NQGFFLEDGA RESSLEHIKA AYELAQKEYE
501: KAEMRYEEAL KIKPDFYEGY LALGHQQFEQ ARLCWCYAMA CKKDLEAGFS DEVLKLYNKA EDSMEKGILM WEEIEEQRLN GISKSDKYKE QLEKMGLDSL
601: LQDISDNEAS KQATKMRSQI HLLWGTLLYE RSVVEYKLGL PTWEECLEVA VEKFELAGTS ATDIAFIVKN HCSNETALEG FKIDEIVQAW NEMYDAQGWQ
701: FGDPSFRLEP LFRRRVPKLH YNLEQF
101: IHQCNLALEV SPRYSKALLK RATCYRELNR FDLALRDVQL VLGMEPNNLT ALELLESLGK STEEKGVSVD DKGVAFDATV HHSPAPSSQK LKKKRGKKTE
201: DNKVVAEEKG LSSSVEDKVS CVGDKVVVVE KVSSVEDKQV VSKTIEQGKR VVEPVEEEKT VTITRSVKLV FGEDIRWAEL PVNCSVKLVR DIARDRYPGL
301: KGALVKYKDK EGDLVTITTT DELRLAEKSA PEKASFRLYI TEVSPDQEPS YDGNGTTNGD EVRRGDGKPS DGAENGDMEE GKDKDVVKRM VTVEDWLLQF
401: ARMFKNHVGF ESDSYLDTHE YAMKLYEEAI EDSVASNDAQ ELFRMAADKF QEMAALALFN WGSVQMSLAR NQGFFLEDGA RESSLEHIKA AYELAQKEYE
501: KAEMRYEEAL KIKPDFYEGY LALGHQQFEQ ARLCWCYAMA CKKDLEAGFS DEVLKLYNKA EDSMEKGILM WEEIEEQRLN GISKSDKYKE QLEKMGLDSL
601: LQDISDNEAS KQATKMRSQI HLLWGTLLYE RSVVEYKLGL PTWEECLEVA VEKFELAGTS ATDIAFIVKN HCSNETALEG FKIDEIVQAW NEMYDAQGWQ
701: FGDPSFRLEP LFRRRVPKLH YNLEQF
001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ
Arabidopsis Description
Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.