Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH02008 | Soybean | nucleus | 89.86 | 89.05 |
VIT_00s1384g00010.t01 | Wine grape | cytosol | 6.76 | 86.67 |
VIT_00s0787g00010.t01 | Wine grape | cytosol | 15.86 | 85.92 |
PGSC0003DMT400043113 | Potato | cytosol | 68.01 | 67.22 |
Solyc02g081200.1.1 | Tomato | nucleus | 68.01 | 67.22 |
PGSC0003DMT400055266 | Potato | cytosol | 67.1 | 66.84 |
Solyc02g036360.1.1 | Tomato | nucleus | 65.8 | 66.49 |
VIT_02s0012g02600.t01 | Wine grape | cytosol | 13.39 | 66.03 |
AT1G62390.1 | Thale cress | plastid | 62.03 | 63.52 |
VIT_00s1008g00010.t01 | Wine grape | cytosol | 17.82 | 58.55 |
CDY69227 | Canola | cytosol | 36.41 | 58.21 |
VIT_17s0000g03920.t01 | Wine grape | cytosol | 14.95 | 57.5 |
GSMUA_Achr1P18260_001 | Banana | nucleus | 51.76 | 56.37 |
CDY30038 | Canola | cytosol, plastid | 60.21 | 56.05 |
Bra019727.1-P | Field mustard | cytosol | 59.95 | 54.17 |
EES00364 | Sorghum | plastid | 54.36 | 53.59 |
Zm00001d039966_P001 | Maize | plastid | 54.36 | 53.52 |
TraesCS5D01G170500.1 | Wheat | nucleus | 53.45 | 52.69 |
TraesCS5A01G164700.1 | Wheat | nucleus, plastid | 53.45 | 52.49 |
Os09t0135400-01 | Rice | nucleus | 53.45 | 52.29 |
TraesCS5B01G163300.1 | Wheat | nucleus, plastid | 53.32 | 52.23 |
HORVU5Hr1G051200.1 | Barley | mitochondrion | 52.93 | 50.25 |
KRH05201 | Soybean | cytosol | 15.34 | 39.2 |
KRH03587 | Soybean | nucleus | 33.42 | 35.45 |
KRH20222 | Soybean | nucleus | 33.03 | 35.08 |
KRH37816 | Soybean | cytosol | 32.77 | 34.52 |
KRH61724 | Soybean | cytosol | 31.6 | 33.47 |
KRH52396 | Soybean | cytosol | 4.16 | 31.07 |
KRH05202 | Soybean | cytosol | 13.91 | 30.75 |
KRG84467 | Soybean | cytosol | 5.07 | 30.0 |
Protein Annotations
Gene3D:1.25.40.10 | EntrezGene:100784987 | MapMan:20.2.4.5 | Gene3D:3.10.20.90 | EMBL:ACUP02004729 | ncoils:Coil |
EnsemblPlantsGene:GLYMA_07G264300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1KNI0 | InterPro:IPR000270 |
InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | EnsemblPlants:KRH51148 | ProteinID:KRH51148 | ProteinID:KRH51148.1 |
InterPro:PB1_dom | PFAM:PF00564 | PFscan:PS50005 | PFscan:PS50293 | PFscan:PS51745 | PANTHER:PTHR22904 |
PANTHER:PTHR22904:SF437 | SMART:SM00028 | SMART:SM00666 | SUPFAM:SSF48452 | SUPFAM:SSF54277 | InterPro:TPR-contain_dom |
InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0002339084 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr7:-:43860371..43863530
Molecular Weight (calculated)
84552.6 Da
IEP (calculated)
5.697
GRAVY (calculated)
-0.630
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKSGGRRKK GGSNANQGGG VDNSGSGAAA PTANGGVEVK KANELKEEGN RRFQNKDYAG ALEQYESALR LTPKTHPDRA VFHSNRAACL MQMKPIDYEA
101: VIAECTMALQ VQPRFVRALL RRARAFEALG KYEMSVQDVQ FLLAADPSNR DALEIAQRLR TALGSRQEAQ QDLHSRPSPA ALGASAVRGA PIAGLGPCLP
201: ARPVAKKGAH SAVGSVVSPN NNKPDKSQPV LPTENGSDTK SQLPKLVLKS SNGSAKPPNP KKEDHKELSS TIHGQRSDVA IRWRPLKLVY DHDIRLAQMP
301: VNCNFRGLRD VVSKRFPSSS SVLIKYKDCD GDLVTITSTD ELRLAESSVD SHLVKEPGED KSDSVAMLRL HIVEVSPEQE PPLLEEEEEK PVENEGGMGE
401: ENGSHSSLGE SVSEVADTVK VDKTVKDTPK EKPGTTGDTE CKEVEMDDWL FEFAQLFRSH VGIDPDAHID LHELGMELCS EALEETVTSE EAQDLFDKAA
501: SKFQEVAALA FFNWGNVHMC AARKRIPLDE SAGQVVVAEQ LQVAYEWVKE KYSLAREKYV EALSIKPDFY EGLLALGQQQ FEMAKLHWSF ALAKKIDLSG
601: WDSKETLQLF DSAEEKMKAA TDMWEKLEEQ RAKELKDSNA TKKEELLRRR KKQGATEGES SSVGGQGEIS AEEAAEQAAV MRSQIHLFWG NMLFERSQVE
701: CKLGMTGWKE NLDAATERFK LAGASEADVS MVLKNHCSNG DAKDGDDKKV ENPQHNKTVK PEINKAHQV
101: VIAECTMALQ VQPRFVRALL RRARAFEALG KYEMSVQDVQ FLLAADPSNR DALEIAQRLR TALGSRQEAQ QDLHSRPSPA ALGASAVRGA PIAGLGPCLP
201: ARPVAKKGAH SAVGSVVSPN NNKPDKSQPV LPTENGSDTK SQLPKLVLKS SNGSAKPPNP KKEDHKELSS TIHGQRSDVA IRWRPLKLVY DHDIRLAQMP
301: VNCNFRGLRD VVSKRFPSSS SVLIKYKDCD GDLVTITSTD ELRLAESSVD SHLVKEPGED KSDSVAMLRL HIVEVSPEQE PPLLEEEEEK PVENEGGMGE
401: ENGSHSSLGE SVSEVADTVK VDKTVKDTPK EKPGTTGDTE CKEVEMDDWL FEFAQLFRSH VGIDPDAHID LHELGMELCS EALEETVTSE EAQDLFDKAA
501: SKFQEVAALA FFNWGNVHMC AARKRIPLDE SAGQVVVAEQ LQVAYEWVKE KYSLAREKYV EALSIKPDFY EGLLALGQQQ FEMAKLHWSF ALAKKIDLSG
601: WDSKETLQLF DSAEEKMKAA TDMWEKLEEQ RAKELKDSNA TKKEELLRRR KKQGATEGES SSVGGQGEIS AEEAAEQAAV MRSQIHLFWG NMLFERSQVE
701: CKLGMTGWKE NLDAATERFK LAGASEADVS MVLKNHCSNG DAKDGDDKKV ENPQHNKTVK PEINKAHQV
001: MGKSGGRKKK SGGSNSNSSQ VNSSETSGLS KPSTIVNGGV DFDASIFLKR AHELKEEGNK KFQARDYVGA LEQYENGIKL IPKSHPDRAV FHSNRAACLM
101: QMKPIDYESV ISECSMALKS QPGFTRALLR RARAFEAVGK FDLAVQDVNV LLGSDPNHKD AGEISKRLKT ALGPHQDLQS RPSPAALGAS AALGGPIAGL
201: GPCLPSRNVH KKGVTSPVGS VSLPNASNGK VERPQVVNPV TENGGSVSKG QASRVVLKPV SHSPKGSKVE ELGSSSVAVV GKVQEKRIRW RPLKFVYDHD
301: IRLGQMPVNC RFKELREIVS SRFPSSKAVL IKYKDNDGDL VTITSTAELK LAESAADCIL TKEPDTDKSD SVGMLRLHVV DVSPEQEPML LEEEEEEVEE
401: KPVIEEVISS PTESLSETEI NTEKTDKEVE KEKASSSEDP ETKELEMDDW LFDFAHLFRT HVGIDPDAHI DLHELGMELC SEALEETVTS EKAQPLFDKA
501: SAKFQEVAAL AFFNWGNVHM CAARKRIPLD ESAGKEVVAA QLQTAYEWVK ERYTLAKEKY EQALSIKPDF YEGLLALGQQ QFEMAKLHWS YLLAQKIDIS
601: GWDPSETLNL FDSAEAKMKD ATEMWEKLEE QRMDDLKNPN SNKKEEVSKR RKKQGGDGNE EVSETITAEE AAEQATAMRS QIHLFWGNML FERSQVECKI
701: GKDGWNKNLD SAVERFKLAG ASEADIATVV KNHCSNEAAA TEGDEKKVPA P
101: QMKPIDYESV ISECSMALKS QPGFTRALLR RARAFEAVGK FDLAVQDVNV LLGSDPNHKD AGEISKRLKT ALGPHQDLQS RPSPAALGAS AALGGPIAGL
201: GPCLPSRNVH KKGVTSPVGS VSLPNASNGK VERPQVVNPV TENGGSVSKG QASRVVLKPV SHSPKGSKVE ELGSSSVAVV GKVQEKRIRW RPLKFVYDHD
301: IRLGQMPVNC RFKELREIVS SRFPSSKAVL IKYKDNDGDL VTITSTAELK LAESAADCIL TKEPDTDKSD SVGMLRLHVV DVSPEQEPML LEEEEEEVEE
401: KPVIEEVISS PTESLSETEI NTEKTDKEVE KEKASSSEDP ETKELEMDDW LFDFAHLFRT HVGIDPDAHI DLHELGMELC SEALEETVTS EKAQPLFDKA
501: SAKFQEVAAL AFFNWGNVHM CAARKRIPLD ESAGKEVVAA QLQTAYEWVK ERYTLAKEKY EQALSIKPDF YEGLLALGQQ QFEMAKLHWS YLLAQKIDIS
601: GWDPSETLNL FDSAEAKMKD ATEMWEKLEE QRMDDLKNPN SNKKEEVSKR RKKQGGDGNE EVSETITAEE AAEQATAMRS QIHLFWGNML FERSQVECKI
701: GKDGWNKNLD SAVERFKLAG ASEADIATVV KNHCSNEAAA TEGDEKKVPA P
Arabidopsis Description
Phox2Protein CLMP1 [Source:UniProtKB/Swiss-Prot;Acc:O48802]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.