CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58928	Canola	cytosol	90.93	91.85
Bra007805.1-P	Field mustard	nucleus	95.75	89.54
CDY38510	Canola	nucleus	78.19	79.31
AT2G25290.4	Thale cress	cytosol	81.16	76.91
CDX83226	Canola	cytosol	77.48	75.97
KRG84467	Soybean	cytosol	13.74	74.62
CDX68815	Canola	cytosol, nucleus, plastid	69.83	72.18
CDX75218	Canola	cytosol	70.25	68.41
CDX72344	Canola	nucleus	67.28	67.66
CDY13473	Canola	nucleus	68.27	66.67
KRH05201	Soybean	cytosol	28.05	65.78
PGSC0003DMT400038437	Potato	cytosol	54.67	57.78
PGSC0003DMT400049152	Potato	cytosol	54.67	57.78
Solyc08g029190.2.1	Tomato	nucleus	54.53	57.55
Solyc06g065910.2.1	Tomato	cytosol	54.53	56.2
PGSC0003DMT400067142	Potato	cytosol	53.97	55.62
VIT_04s0008g06310.t01	Wine grape	mitochondrion	58.92	55.39
KRH61724	Soybean	cytosol	56.94	55.37
GSMUA_Achr4P20360_001	Banana	cytosol	49.86	52.54
Os09t0556200-00	Rice	cytosol, plasma membrane	49.72	51.17
GSMUA_Achr7P05370_001	Banana	cytosol	47.03	50.92
GSMUA_Achr3P00890_001	Banana	cytosol	48.44	50.89
Zm00001d021400_P001	Maize	cytosol	49.15	50.51
EER97166	Sorghum	cytosol	49.29	50.29
GSMUA_Achr4P04120_001	Banana	cytosol	36.4	50.2
TraesCS5A01G357000.1	Wheat	cytosol	48.02	48.78
TraesCS5D01G366100.1	Wheat	cytosol	47.88	48.63
KRH52396	Soybean	cytosol	7.08	48.54
HORVU5Hr1G088290.2	Barley	cytosol	47.59	48.21
TraesCS5B01G359500.1	Wheat	cytosol	47.31	47.92
GSMUA_Achr9P22500_001	Banana	cytosol	46.46	47.61
EES13437	Sorghum	cytosol	46.46	44.15
Zm00001d024424_P001	Maize	cytosol	46.18	43.99
Os08t0296900-01	Rice	cytosol	47.88	43.67
KRH05202	Soybean	cytosol	20.54	41.67
Zm00001d037923_P001	Maize	cytosol	9.35	40.74
CDY51850	Canola	cytosol	34.84	38.68
CDX70924	Canola	cytosol	34.7	38.46
EER96429	Sorghum	plastid	46.46	35.31
Zm00001d019666_P001	Maize	plastid	46.32	35.28
TraesCS5D01G168200.1	Wheat	cytosol	44.33	33.48
TraesCS5B01G160600.1	Wheat	cytosol	44.05	33.26
TraesCS5A01G163200.1	Wheat	cytosol	43.91	33.16
HORVU5Hr1G050890.1	Barley	cytosol	43.77	32.94
CDY69227	Canola	cytosol	21.39	31.39
CDY30038	Canola	cytosol, plastid	35.27	30.15
TraesCS5D01G165100.1	Wheat	cytosol	13.88	25.45
HORVU5Hr1G050130.1	Barley	cytosol	13.88	24.69
TraesCS5A01G160000.1	Wheat	cytosol	12.46	22.22
TraesCS5B01G157700.1	Wheat	cytosol	13.17	21.93

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	UniProt:A0A078FAZ4	EnsemblPlants:CDY11535	ProteinID:CDY11535
ProteinID:CDY11535.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00049621001	InterPro:IPR000270
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50293
PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452
SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EEAEB0	SEG:seg

Description

BnaA09g41010DBnaA09g41010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAZ4]

Coordinates

chrLK032011:+:860155..862502

Molecular Weight (calculated)

79317.4 Da

IEP (calculated)

4.688

GRAVY (calculated)

-0.527

Length

706 amino acids

Sequence
(BLAST)

001: MGKPTGKKKN PDPPTDSSVN GGGGGGGGGG NKSAKSFDRS ASKAAATFDE DMAIFINRAL ELKEEGNKLF QKRDNEGAML RYDKAVKLLP RDHGEVAYLR
101: TGMASCYMHM GLGEYPNAIN ECNLALEASP RYSKALLKRA RCYEALNKMD FAFRDSRIVL NMEAENVSAK EIFERVKKVL VGRGVDVAEM ETSFVDNADV
201: EDGEEADSGK RGDKNLEDKV VVEEKKVSHV MDKEVVIASD ATVTRTVKLV HGDDIRWAQL PLDSSVRLVR DIIRDRFPSL KGFLIKYRDS EGDLVTITTT
301: DELRVAASTR EKLGSFRLYV TEVSPNQEPV YDGESNDKFA KGSSSVADNG SVGGDYVESE KPSGCIEHWI FQFAQLFKNH VGFDSDSYLD IHNLGMKLYT
401: EAMEDIVTGE DAQELFDIAA DKFQEMAALA MFNWGNVHMS KARRQIYFPE DGSRETILEK VEAGFEWATN EYNKAAEKYE EAVKVKSDFY EALLALGQQQ
501: FEQAKLCWYH ALRNKIDIES EASQEVLKLY NKAEESMEKG MQIWEEMEER RLNGISDSDK HKTLLQKLGL DGVFSEASDE DNAEQTANMT SQINLLWGSL
601: LYERSIVEYK LGLPTWDECL EVAVEKFELA GASATDIAVM VKNHCSNENA LEGMGFKIDE IVQAWNEMYD AKRWQIGVPS FRLEPLFRRR SPKLHDILEN
701: VFTGPQ

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.