Factsheet for Bra007805.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11535	Canola	nucleus	89.54	95.75
CDY58928	Canola	cytosol	84.37	91.13
AT2G25290.4	Thale cress	cytosol	79.47	80.54
Bra000549.1-P	Field mustard	nucleus	78.15	77.12
KRG84467	Soybean	cytosol	12.85	74.62
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	67.95	71.05
Bra023964.1-P	Field mustard	nucleus	63.84	66.3
KRH05201	Soybean	cytosol	26.23	65.78
Solyc08g029190.2.1	Tomato	nucleus	51.39	58.0
PGSC0003DMT400038437	Potato	cytosol	50.86	57.48
PGSC0003DMT400049152	Potato	cytosol	50.86	57.48
Solyc06g065910.2.1	Tomato	cytosol	51.92	57.23
PGSC0003DMT400067142	Potato	cytosol	51.26	56.5
VIT_04s0008g06310.t01	Wine grape	mitochondrion	56.16	56.46
KRH61724	Soybean	cytosol	53.51	55.65
GSMUA_Achr4P20360_001	Banana	cytosol	47.15	53.13
GSMUA_Achr7P05370_001	Banana	cytosol	44.77	51.84
Os09t0556200-00	Rice	cytosol, plasma membrane	47.02	51.75
GSMUA_Achr3P00890_001	Banana	cytosol	45.96	51.64
Zm00001d021400_P001	Maize	cytosol	46.36	50.95
GSMUA_Achr4P04120_001	Banana	cytosol	34.3	50.59
EER97166	Sorghum	cytosol	46.36	50.58
TraesCS5A01G357000.1	Wheat	cytosol	45.56	49.5
TraesCS5D01G366100.1	Wheat	cytosol	45.43	49.35
HORVU5Hr1G088290.2	Barley	cytosol	45.17	48.92
TraesCS5B01G359500.1	Wheat	cytosol	44.9	48.64
KRH52396	Soybean	cytosol	6.62	48.54
GSMUA_Achr9P22500_001	Banana	cytosol	44.11	48.33
Zm00001d024424_P001	Maize	cytosol	44.5	45.34
Os08t0296900-01	Rice	cytosol	46.23	45.09
EES13437	Sorghum	cytosol	43.18	43.88
KRH05202	Soybean	cytosol	19.21	41.67
Zm00001d037923_P001	Maize	cytosol	8.74	40.74
Bra006557.1-P	Field mustard	cytosol	33.51	38.05
EER96429	Sorghum	plastid	44.9	36.49
Zm00001d019666_P001	Maize	plastid	43.84	35.71
TraesCS5D01G168200.1	Wheat	cytosol	41.46	33.48
TraesCS5B01G160600.1	Wheat	cytosol	41.32	33.37
HORVU5Hr1G050890.1	Barley	cytosol	41.19	33.16
TraesCS5A01G163200.1	Wheat	cytosol	41.06	33.16
Bra019727.1-P	Field mustard	cytosol	32.85	29.14
TraesCS5D01G165100.1	Wheat	cytosol	13.11	25.71
HORVU5Hr1G050130.1	Barley	cytosol	13.51	25.69
TraesCS5A01G160000.1	Wheat	cytosol	11.26	21.46
TraesCS5B01G157700.1	Wheat	cytosol	11.92	21.23

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	EnsemblPlantsGene:Bra007805	EnsemblPlants:Bra007805.1	EnsemblPlants:Bra007805.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	UniProt:M4CUB1	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50293
PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452
SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002542CA3	SEG:seg

Description

AT2G25290 (E=0.0) | binding

Coordinates

chrA09:+:30965762..30968109

Molecular Weight (calculated)

84860.1 Da

IEP (calculated)

5.001

GRAVY (calculated)

-0.580

Length

755 amino acids

Sequence
(BLAST)

001: MGKPTGKKKN PDPPTDSSVN GGGGGGGGGG NKSAKSFDRS ASKAAATFDE DMAIFINRAL ELKEEGNKLF QKRDNEGAML RYDKAVKLLP RDHAEVAYLR
101: TGMASCYMHM GLGEYPNAIN ECNLALEASP RYSKALLKRA RCYEALNKMD FAFRDSRIVL NMEAENVSAK EIFERVKKVL VGRGVDVAEM ETSFVDVQPV
201: GAARLRKIVK ERLRKMKKKN NNNNKKNSNS NAEEKKSNEG GVVVENADVE DGEEADSGKR GDKNLEDKVV VEEKKVSHVM DKEVVIASDA TVTRTVKLVH
301: GDDIRWAQLP LDSSVRLVRD IIRDRFPSLK GFLIKYRDSE GDLVTITTTD ELRVAASTRE KLGSFRLYVT EVSPNQEPVY DGESNDKFAK GSSSVADNGS
401: VGGDYVESEK PSACIEHWIF QFAQLFKNHV GFDSDSYLDI HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED
501: GSRETILEKV QAGFEWATNE YNKAAEKYEE AVKVKSDFYE ALLALGQQQF EQAKLCWYHA LRNKIDIESE ASQEVLKLYN KAEESMEKGM QIWEEMEERR
601: LNGISDSDKH KTLLQKLGLD GVFSEASDED NAEQTANMTS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSNENAL
701: EGMGFKIDEI VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FTGPQ

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.