CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11535	Canola	nucleus	91.85	90.93
Bra007805.1-P	Field mustard	nucleus	91.13	84.37
CDY38510	Canola	nucleus	78.54	78.88
CDX83226	Canola	cytosol	78.4	76.11
AT2G25290.4	Thale cress	cytosol	80.97	75.97
KRG84467	Soybean	cytosol	13.88	74.62
CDX68815	Canola	cytosol, nucleus, plastid	69.67	71.3
CDX75218	Canola	cytosol	69.53	67.03
CDX72344	Canola	nucleus	67.24	66.95
CDY13473	Canola	nucleus	67.81	65.56
KRH05201	Soybean	cytosol	28.18	65.45
Solyc08g029190.2.1	Tomato	nucleus	55.65	58.15
PGSC0003DMT400038437	Potato	cytosol	54.94	57.48
PGSC0003DMT400049152	Potato	cytosol	54.94	57.48
Solyc06g065910.2.1	Tomato	cytosol	55.65	56.79
PGSC0003DMT400067142	Potato	cytosol	54.94	56.06
VIT_04s0008g06310.t01	Wine grape	mitochondrion	59.8	55.66
KRH61724	Soybean	cytosol	56.94	54.82
GSMUA_Achr4P20360_001	Banana	cytosol	50.07	52.24
Os09t0556200-00	Rice	cytosol, plasma membrane	50.07	51.02
GSMUA_Achr7P05370_001	Banana	cytosol	47.5	50.92
GSMUA_Achr3P00890_001	Banana	cytosol	48.93	50.89
Zm00001d021400_P001	Maize	cytosol	49.07	49.93
GSMUA_Achr4P04120_001	Banana	cytosol	36.48	49.8
EER97166	Sorghum	cytosol	49.21	49.71
TraesCS5A01G357000.1	Wheat	cytosol	48.5	48.78
KRH52396	Soybean	cytosol	7.15	48.54
TraesCS5D01G366100.1	Wheat	cytosol	47.93	48.2
HORVU5Hr1G088290.2	Barley	cytosol	47.78	47.92
TraesCS5B01G359500.1	Wheat	cytosol	47.5	47.63
GSMUA_Achr9P22500_001	Banana	cytosol	46.35	47.02
Os08t0296900-01	Rice	cytosol	48.78	44.06
EES13437	Sorghum	cytosol	46.49	43.74
Zm00001d024424_P001	Maize	cytosol	46.21	43.59
KRH05202	Soybean	cytosol	20.31	40.8
Zm00001d037923_P001	Maize	cytosol	9.44	40.74
CDX70924	Canola	cytosol	35.48	38.93
CDY51850	Canola	cytosol	34.91	38.36
Zm00001d019666_P001	Maize	plastid	46.78	35.28
EER96429	Sorghum	plastid	46.64	35.09
TraesCS5B01G160600.1	Wheat	cytosol	44.92	33.58
TraesCS5D01G168200.1	Wheat	cytosol	44.92	33.58
TraesCS5A01G163200.1	Wheat	cytosol	44.64	33.37
HORVU5Hr1G050890.1	Barley	cytosol	44.21	32.94
CDY69227	Canola	cytosol	21.32	30.98
CDY30038	Canola	cytosol, plastid	35.19	29.78
TraesCS5D01G165100.1	Wheat	cytosol	14.16	25.71
HORVU5Hr1G050130.1	Barley	cytosol	13.88	24.43
TraesCS5A01G160000.1	Wheat	cytosol	12.3	21.72
TraesCS5B01G157700.1	Wheat	cytosol	13.16	21.7

Protein Annotations

Gene3D:1.25.40.10	MapMan:20.2.4.5	Gene3D:3.10.20.90	UniProt:A0A078J4N4	EnsemblPlants:CDY58928	ProteinID:CDY58928
ProteinID:CDY58928.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00025332001	InterPro:IPR000270
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:PB1_dom	PFAM:PF00564	PFscan:PS50293
PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028	SMART:SM00666	SUPFAM:SSF48452
SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EEB7BA	SEG:seg

Description

BnaC08g49090DBnaC08g49090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4N4]

Coordinates

chrLK033712:+:28613..30949

Molecular Weight (calculated)

78952.2 Da

IEP (calculated)

4.807

GRAVY (calculated)

-0.509

Length

699 amino acids

Sequence
(BLAST)

001: MGKPTGKKKN PDPPTDSSVS GGGNKSAKSF DRSASKAAAT FDEDMAIFIN RALELKEEGN KLFQKRDNEG AMLRYDKAVK LLPKDHGEVA YLRTGMASCY
101: MHMGLGEYPN AINECNLALE ASPRYSKALL KRARCYEALN KMDFAFRDSR IVLNMEAENV SAKEIFERVR KVLVGRGVDV AEMEKSFSAD VEDGEEADSG
201: KRGDKNLEDK VVVEEKKVSH VMDKEVVIAS QIDATVTRTV KLVHGDDIRW AQLPLDSSVR LVRDIIRDRF PSLKGFLIKY RDSEGDLVTI TTTDELRVAA
301: STREKLGSFR LYVTEVSPIQ EPVYDGESND KFAKGSSSVA DNGSVGGDYV ESEKPSACIE HWIFQFAQLF KNHVGFDSDS YLDIHNLGMK LYTEAMEDIV
401: TGEDAQELFD IAAHKFQEMA ALAMFNWGNV HMSKARRQIY FPEDGSRETI LEKVEAGFEW ATNEYNKAAE KYEEAVKVKS DFYEALLALG QQQFEQAKLC
501: WYHALRNKID IESQASQEVL KLYNKAEESM EKGMQIWEEM EERRLNGISD SDKHKTLLQK LGLDGVFSEA SDEDNAEQTA NMTSQINLLW GSLLYERSIV
601: EYKLGLPTWD ECLEVAVEKF ELAGASATDI AVMVKNHCSN ENALEGMGFK IDEIVQAWNE MYDAKRWQIG VPSFRLEPLF RRRSPKLHDI LENVFTGPQ

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.