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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G32070.1 TraesCS4A01G206200.2 AT4G09570.1 19130088
AT4G32070.1 TraesCS4B01G109800.2 AT4G09570.1 19130088
AT4G32070.1 TraesCS4D01G107200.1 AT4G09570.1 19130088
AT4G32070.1 TraesCS5A01G107900.1 AT4G09570.1 19130088
AT4G32070.1 TraesCS5B01G115400.1 AT4G09570.1 19130088
AT4G32070.1 TraesCS5D01G122800.1 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G050130.1 Barley cytosol 76.62 74.31
TraesCS5A01G160000.1 Wheat cytosol 46.23 44.95
TraesCS5B01G157700.1 Wheat cytosol 47.53 43.16
KRH05202 Soybean cytosol 25.19 27.87
KRH52396 Soybean cytosol 5.97 22.33
GSMUA_Achr7P05370_001 Banana cytosol 27.01 15.95
GSMUA_Achr3P00890_001 Banana cytosol 26.75 15.33
TraesCS5D01G366100.1 Wheat cytosol 27.01 14.96
GSMUA_Achr4P20360_001 Banana cytosol 25.97 14.93
Solyc06g065910.2.1 Tomato cytosol 26.49 14.89
GSMUA_Achr9P22500_001 Banana cytosol 26.49 14.8
VIT_11s0118g00490.t01 Wine grape cytosol 25.97 14.75
PGSC0003DMT400067142 Potato cytosol 26.23 14.74
CDX72344 Canola nucleus 26.75 14.67
KRH61724 Soybean cytosol 27.53 14.6
CDX70924 Canola cytosol 24.16 14.6
Os08t0296900-01 Rice cytosol 28.83 14.34
Bra023964.1-P Field mustard nucleus 27.01 14.31
CDY13473 Canola nucleus 26.75 14.25
Solyc08g029190.2.1 Tomato nucleus 24.68 14.2
CDY58928 Canola cytosol 25.71 14.16
EES13437 Sorghum cytosol 27.01 14.0
CDY11535 Canola nucleus 25.45 13.88
VIT_04s0008g06310.t01 Wine grape mitochondrion 27.01 13.85
CDY51850 Canola cytosol 22.86 13.84
Bra006557.1-P Field mustard cytosol 23.9 13.83
AT2G25290.4 Thale cress cytosol 26.75 13.83
CDX75218 Canola cytosol 25.97 13.79
PGSC0003DMT400038437 Potato cytosol 23.9 13.77
PGSC0003DMT400049152 Potato cytosol 23.9 13.77
Zm00001d024424_P001 Maize cytosol 26.49 13.77
Bra011320.1-P Field mustard cytosol, nucleus, plastid 25.71 13.71
TraesCS5D01G168200.1 Wheat cytosol 33.25 13.69
CDX68815 Canola cytosol, nucleus, plastid 23.9 13.47
Solyc07g007390.2.1 Tomato nucleus 26.75 13.24
Bra007805.1-P Field mustard nucleus 25.71 13.11
CDY38510 Canola nucleus 23.64 13.07
KRH37816 Soybean cytosol 24.68 13.01
PGSC0003DMT400078952 Potato cytosol 27.27 12.95
CDX83226 Canola cytosol 24.16 12.92
Bra000549.1-P Field mustard nucleus 25.45 12.81
KRH20222 Soybean nucleus 23.64 12.57
AT4G32070.1 Thale cress nucleus 24.94 12.28
KRH03587 Soybean nucleus 22.86 12.14
AT5G20360.1 Thale cress cytosol 22.08 10.51
TraesCS5D01G170500.1 Wheat nucleus 20.26 10.0
GSMUA_Achr4P04120_001 Banana cytosol 8.57 6.45
KRH05201 Soybean cytosol 1.82 2.33
KRG84467 Soybean cytosol 0.78 2.31
Protein Annotations
Gene3D:1.25.40.10MapMan:20.2.4.5ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR000270InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734InterPro:PB1_domPFAM:PF00564
PFscan:PS50005PFscan:PS50293PANTHER:PTHR22904PANTHER:PTHR22904:SF419SMART:SM00028SUPFAM:SSF48452
SUPFAM:SSF54277InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatEnsemblPlantsGene:TraesCS5D01G165100EnsemblPlants:TraesCS5D01G165100.1
TIGR:cd05992SEG:seg::::
Description
No Description!
Coordinates
chr5D:+:256723465..256724886
Molecular Weight (calculated)
42985.2 Da
IEP (calculated)
4.162
GRAVY (calculated)
-0.760
Length
385 amino acids
Sequence
(BLAST)
001: MSSEQEHPET SELEEEAEKD EDAAIVELVT ELKQEGTTLF RLRDYDGAAF KFDEAIRLSP RAPRAYNEND IASLHSNVAA CYMHMNAHRP EDDYHYHQAI
101: DRCNMALDAS PRYTKALLKR ARCFEALDRL DLACVDVQEV LTLEPNNAVA LELLENLREE MEEKKFLLEQ EARSLDDLIK VISASEKVAK QFSCTIATAA
201: DPAKKAVSTE TDDQDAEAIL IHGDGEQDDE QASYDDNDGE EAPSGQTEEE AHVGDQSGQN KQEDGDNAEH GSGATRCVEL FLGEEGDVRR IALLPQDGGL
301: AQLMDIARSK FPDLKELSVN FKDDRGDLVT VDSTTDQSAW FDEANSRSQG PLRLYVTEGN RERVSCPDQP IREHHSVDPC LSHDQ
Best Arabidopsis Sequence Match ( AT2G25290.1 )
(BLAST)
001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ
Arabidopsis Description
Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.