Factsheet for PGSC0003DMT400067142

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400002331
PGSC0003DMT400067082

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32070.1	PGSC0003DMT400002331	AT4G09570.1	19130088
AT4G32070.1	PGSC0003DMT400067082	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g065910.2.1	Tomato	cytosol	96.93	96.93
KRG84467	Soybean	cytosol	14.01	73.85
PGSC0003DMT400038437	Potato	cytosol	69.05	70.81
PGSC0003DMT400049152	Potato	cytosol	69.05	70.81
KRH05201	Soybean	cytosol	27.88	63.46
VIT_04s0008g06310.t01	Wine grape	mitochondrion	64.23	58.59
GSMUA_Achr4P20360_001	Banana	cytosol	55.77	57.01
KRH52396	Soybean	cytosol	8.47	56.31
CDX68815	Canola	cytosol, nucleus, plastid	56.06	56.22
GSMUA_Achr3P00890_001	Banana	cytosol	54.16	55.21
GSMUA_Achr7P05370_001	Banana	cytosol	52.41	55.06
CDY58928	Canola	cytosol	56.06	54.94
KRH61724	Soybean	cytosol	57.81	54.55
CDY38510	Canola	nucleus	55.18	54.31
CDX75218	Canola	cytosol	57.37	54.21
Bra011320.1-P	Field mustard	cytosol, nucleus, plastid	57.08	54.16
CDY11535	Canola	nucleus	55.62	53.97
CDX83226	Canola	cytosol	56.06	53.33
CDX72344	Canola	nucleus	53.43	52.14
AT2G25290.4	Thale cress	cytosol	56.35	51.81
CDY13473	Canola	nucleus	54.45	51.59
Os09t0556200-00	Rice	cytosol, plasma membrane	51.53	51.46
Bra007805.1-P	Field mustard	nucleus	56.5	51.26
Zm00001d021400_P001	Maize	cytosol	51.24	51.09
Bra023964.1-P	Field mustard	nucleus	54.16	51.03
EER97166	Sorghum	cytosol	51.53	51.01
AT4G32070.1	Thale cress	nucleus	58.1	50.9
Bra000549.1-P	Field mustard	nucleus	56.5	50.59
GSMUA_Achr4P04120_001	Banana	cytosol	37.52	50.2
GSMUA_Achr9P22500_001	Banana	cytosol	50.07	49.78
TraesCS5D01G366100.1	Wheat	cytosol	50.22	49.5
TraesCS5A01G357000.1	Wheat	cytosol	50.07	49.35
HORVU5Hr1G088290.2	Barley	cytosol	49.78	48.92
TraesCS5B01G359500.1	Wheat	cytosol	49.63	48.78
PGSC0003DMT400078952	Potato	cytosol	57.37	48.46
KRH05202	Soybean	cytosol	22.34	43.97
Os08t0296900-01	Rice	cytosol	48.61	43.02
EES13437	Sorghum	cytosol	45.26	41.72
Zm00001d024424_P001	Maize	cytosol	44.96	41.57
Zm00001d037923_P001	Maize	cytosol	9.2	38.89
EER96429	Sorghum	plastid	47.59	35.09
Zm00001d019666_P001	Maize	plastid	47.01	34.74
PGSC0003DMT400043113	Potato	cytosol	38.54	33.93
TraesCS5A01G163200.1	Wheat	cytosol	46.28	33.9
TraesCS5B01G160600.1	Wheat	cytosol	46.28	33.9
TraesCS5D01G168200.1	Wheat	cytosol	46.28	33.9
PGSC0003DMT400055266	Potato	cytosol	37.23	33.03
HORVU5Hr1G050890.1	Barley	cytosol	44.67	32.62
TraesCS5D01G165100.1	Wheat	cytosol	14.74	26.23
HORVU5Hr1G050130.1	Barley	cytosol	14.74	25.44
TraesCS5A01G160000.1	Wheat	cytosol	14.01	24.24
TraesCS5B01G157700.1	Wheat	cytosol	14.74	23.82

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:102581551	MapMan:20.2.4.5	Gene3D:3.10.20.90	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000270	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
UniProt:M1CGS2	InterPro:PB1_dom	PFAM:PF00564	EnsemblPlantsGene:PGSC0003DMG400026101	PGSC:PGSC0003DMG400026101	EnsemblPlants:PGSC0003DMT400067142
PFscan:PS50005	PFscan:PS50293	PFscan:PS51745	PANTHER:PTHR22904	PANTHER:PTHR22904:SF419	SMART:SM00028
SMART:SM00666	SUPFAM:SSF48452	SUPFAM:SSF54277	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI000296E4EC	RefSeq:XP_006353670.1	SEG:seg	:	:	:

Description

Heat shock protein 70 (HSP70)-interacting protein [Source:PGSC_GENE;Acc:PGSC0003DMG400026101]

Coordinates

chr6:-:45808691..45813938

Molecular Weight (calculated)

78967.2 Da

IEP (calculated)

5.081

GRAVY (calculated)

-0.587

Length

685 amino acids

Sequence
(BLAST)

001: MGKPTGKTKS NVKSKSNDGN VKHKSKAFDE DTAVFIKMSK DLKEEGNRFF QKRDHEGAML KYEKALKLLP RNHIDVAYLH SNLASCYMQM GRSEFPRAIN
101: ECNLALEVAP KYSKALLKRA KCYESLNRLD LALRDVNHVL SIEPNNLTAL EIADKVKKEI EEILKVENKK LVLPLPESAN VVKDNMKKEK KNNKFDRKRI
201: VEIKETKIDG VEEKKAEDKV VVEEKRTVQG EKTMTRTVKL VLGEDIRWAQ LPVGCSIRLV RDIVLDRFPN LKGALIKYRD QEGDLVTITT TDELRLAESS
301: VDLQGSLRLY IKEVSPDKEP MYLRVDEDEK SSICRSTIVK KDGELNEGPI CPENWFVQFT RLFKNHVGVD CDSYLDLHET GMKLYSEAME DTVTNEEAEG
401: LFDIASAQFQ EMAALSLFNW GNVHMSRARK EVFFTEEGSG ETVSEQVRSA YEWAEKEYET AEMRYEEALR VKPDFYESLL ALGQQQFEQA KLSWYYLVGS
501: KVELETGTCA EILELYNKAE DSIDRGMEMW EEMEEQHLNG LSKYEEYKAQ LYKRGLEGIL KDKSSEETKE QTENMRSQIY LLWGTMLYER SVVEFKIGLP
601: TWEECLDVAV EKFELAGASH SDIAVMIKNH CSNETALEGF KVDEIVQAWS EMYDTNRWQT GVPTFRLEPL FRRRVSSLHS ILENI

Best Arabidopsis Sequence Match ( AT2G25290.2 )
(BLAST)

001: MGKPTGKKKN NNYTEMPPTE SSTTGGGKTG KSFDRSATKS FDDDMTIFIN RALELKEEGN KLFQKRDYEG AMFRYDKAVK LLPRDHGDVA YLRTSMASCY
101: MQMGLGEYPN AINECNLALE ASPRFSKALL KRARCYEALN KLDFAFRDSR VVLNMEPENV SANEIFERVK KVLVGKGIDV DEMEKNLVNV QPVGAARLRK
201: IVKERLRKKK KKSMTMTNGG NDGERKSVEA VVEDAKVDNG EEVDSGRKGK AIEEKKLEDK VAVMDKEVIA SEIKEDATVT RTVKLVHGDD IRWAQLPLDS
301: SVVLVRDVIK DRFPALKGFL IKYRDSEGDL VTITTTDELR LAASTREKLG SFRLYIAEVS PNQEPTYDVI DNDESTDKFA KGSSSVADNG SVGDFVESEK
401: ASTSLEHWIF QFAQLFKNHV GFDSDSYLEL HNLGMKLYTE AMEDIVTGED AQELFDIAAD KFQEMAALAM FNWGNVHMSK ARRQIYFPED GSRETILEKV
501: EAGFEWAKNE YNKAAEKYEG AVKIKSDFYE ALLALGQQQF EQAKLCWYHA LSGEVDIESD ASQDVLKLYN KAEESMEKGM QIWEEMEERR LNGISNFDKH
601: KELLQKLGLD GIFSEASDEE SAEQTANMSS QINLLWGSLL YERSIVEYKL GLPTWDECLE VAVEKFELAG ASATDIAVMV KNHCSSDNAL EGMGFKIDEI
701: VQAWNEMYDA KRWQIGVPSF RLEPLFRRRS PKLHDILENV FSGPQ

Arabidopsis Description

Phox1Phox1 [Source:UniProtKB/TrEMBL;Acc:A0A178VW51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.