Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013323_P001 | Maize | cytosol | 97.44 | 96.82 |
| Zm00001d033919_P001 | Maize | plasma membrane | 96.79 | 96.49 |
| Os03t0736500-01 | Rice | cytosol, plasma membrane | 87.18 | 87.46 |
| TraesCS4A01G247700.1 | Wheat | cytosol | 83.65 | 82.59 |
| TraesCS4D01G066100.1 | Wheat | cytosol | 83.33 | 82.28 |
| TraesCS4B01G067200.1 | Wheat | cytosol | 82.69 | 82.17 |
| TraesCS4B01G067100.1 | Wheat | cytosol | 42.63 | 81.6 |
| HORVU4Hr1G011180.2 | Barley | cytosol | 82.37 | 70.8 |
| GSMUA_Achr1P25170_001 | Banana | cytosol | 54.81 | 69.8 |
| KRH08461 | Soybean | cytosol | 67.31 | 65.22 |
| VIT_04s0008g02770.t01 | Wine grape | cytosol | 64.74 | 64.95 |
| Solyc06g053760.2.1 | Tomato | cytosol | 64.74 | 64.95 |
| PGSC0003DMT400041982 | Potato | cytosol | 64.42 | 64.63 |
| KRH70119 | Soybean | cytosol | 65.71 | 64.47 |
| CDX95050 | Canola | cytosol | 60.26 | 61.24 |
| CDX97497 | Canola | cytosol | 59.29 | 61.06 |
| CDX93553 | Canola | cytosol | 59.94 | 60.91 |
| Bra018615.1-P | Field mustard | cytosol | 59.62 | 60.59 |
| Bra030733.1-P | Field mustard | cytosol | 58.97 | 60.53 |
| CDY31137 | Canola | cytosol | 58.65 | 60.2 |
| AT1G08560.1 | Thale cress | cytosol | 59.29 | 59.68 |
| EES06503 | Sorghum | cytosol | 50.0 | 49.52 |
| EER89986 | Sorghum | cytosol | 47.44 | 47.9 |
| EER93336 | Sorghum | cytosol | 43.59 | 44.3 |
| EER97312 | Sorghum | cytosol | 41.35 | 42.3 |
| EES16084 | Sorghum | cytosol | 37.5 | 38.11 |
| EER98026 | Sorghum | cytosol | 36.22 | 37.29 |
| OQU78880 | Sorghum | cytosol | 31.73 | 32.14 |
Protein Annotations
| Gene3D:1.20.58.70 | MapMan:13.4.2.3.1 | MapMan:22.7.1.1 | UniProt:A0A1B6QI70 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009504 |
| GO:GO:0009506 | GO:GO:0009524 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0061025 | InterPro:IPR000727 | EnsemblPlants:KXG37622 | ProteinID:KXG37622 |
| ProteinID:KXG37622.1 | PFAM:PF00804 | PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 |
| PANTHER:PTHR19957:SF91 | SMART:SM00397 | SMART:SM00503 | InterPro:SNARE | EnsemblPlantsGene:SORBI_3001G098900 | SUPFAM:SSF47661 |
| InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI00081AB77D | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:7576259..7577203
Molecular Weight (calculated)
34699.9 Da
IEP (calculated)
6.614
GRAVY (calculated)
-0.321
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLMTKSFM SYVDLKKAAM KDLEAGGDGI ELPESGAGGV TDERLRGFFE EAEAVKAEMA AIRDALDRLH AANEEGKSLH QADALRAHRG RVNADIVAVL
101: RRARDIRARL ESLDRANAAQ RRLSAGCREG TPLDRTRTAV TAGLRKKLKD LMLDFQALRQ RMMSEYKETV ERRYYTLTGE VPEEEVIERI ISDGRGEELL
201: GAAVAEHGKG AVLAAVHEIQ DRHDAAREVE RSLLELHQVF LDMAVMVEMQ GEKLDDIESH VANASHYSGN KELGKAKEYQ RSSRKCLCIG IIILLLLVLL
301: VIVPIATSLR RS
101: RRARDIRARL ESLDRANAAQ RRLSAGCREG TPLDRTRTAV TAGLRKKLKD LMLDFQALRQ RMMSEYKETV ERRYYTLTGE VPEEEVIERI ISDGRGEELL
201: GAAVAEHGKG AVLAAVHEIQ DRHDAAREVE RSLLELHQVF LDMAVMVEMQ GEKLDDIESH VANASHYSGN KELGKAKEYQ RSSRKCLCIG IIILLLLVLL
301: VIVPIATSLR RS
001: MNDLMTKSFM SYVDLKKAAM KDMEAGPDFD LEMASTKADK MDENLSSFLE EAEYVKAEMG LISETLARIE QYHEESKGVH KAESVKSLRN KISNEIVSGL
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
101: RKAKSIKSKL EEMDKANKEI KRLSGTPVYR SRTAVTNGLR KKLKEVMMEF QGLRQKMMSE YKETVERRYF TVTGEHANDE MIEKIITDNA GGEEFLTRAI
201: QEHGKGKVLE TVVEIQDRYD AAKEIEKSLL ELHQVFLDMA VMVESQGEQM DEIEHHVINA SHYVADGANE LKTAKSHQRN SRKWMCIGII VLLLIILIVV
301: IPIITSFSSS
Arabidopsis Description
KNSYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.