Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22542 | Soybean | endoplasmic reticulum, extracellular, mitochondrion | 98.37 | 98.37 |
| VIT_12s0059g02340.t01 | Wine grape | cytosol | 75.82 | 76.32 |
| Solyc07g052470.2.1 | Tomato | cytosol | 72.22 | 72.46 |
| PGSC0003DMT400065519 | Potato | cytosol | 71.9 | 70.51 |
| TraesCS2D01G224100.1 | Wheat | cytosol | 65.69 | 66.34 |
| TraesCS2B01G244700.1 | Wheat | cytosol | 65.36 | 66.01 |
| TraesCS2A01G219200.1 | Wheat | cytosol | 65.03 | 65.68 |
| KRH08507 | Soybean | cytosol | 65.36 | 64.94 |
| EER97312 | Sorghum | cytosol | 64.38 | 64.59 |
| HORVU2Hr1G045350.3 | Barley | cytosol | 61.76 | 64.51 |
| Os07t0528900-00 | Rice | cytosol, extracellular, plasma membrane | 22.55 | 62.16 |
| GSMUA_Achr9P24850_001 | Banana | cytosol | 55.88 | 61.07 |
| KRH70169 | Soybean | cytosol | 28.76 | 59.86 |
| Zm00001d021664_P001 | Maize | cytosol | 58.17 | 50.0 |
| KRH41917 | Soybean | cytosol | 45.42 | 45.72 |
| KRH21567 | Soybean | cytosol | 44.12 | 44.41 |
| KRH10761 | Soybean | cytosol | 44.12 | 44.41 |
| KRH32862 | Soybean | cytosol | 44.12 | 44.12 |
| KRH72168 | Soybean | cytosol | 43.79 | 43.93 |
| KRH08461 | Soybean | cytosol | 45.1 | 42.86 |
| KRH70119 | Soybean | cytosol | 44.44 | 42.77 |
| KRH72169 | Soybean | cytosol | 45.1 | 41.19 |
| KRH32861 | Soybean | mitochondrion | 44.12 | 40.66 |
| KRG96271 | Soybean | cytosol, golgi, mitochondrion | 36.27 | 36.88 |
| KRH68016 | Soybean | cytosol | 34.97 | 36.39 |
| KRH28699 | Soybean | cytosol | 33.33 | 34.11 |
| KRH76768 | Soybean | cytosol | 32.68 | 33.44 |
| HORVU2Hr1G043130.15 | Barley | cytosol | 29.09 | 28.34 |
| TraesCS2B01G238200.2 | Wheat | cytosol | 27.45 | 27.27 |
| KRH43180 | Soybean | cytosol | 22.22 | 26.46 |
| TraesCS2A01G213400.1 | Wheat | cytosol | 21.57 | 24.63 |
| TraesCS2D01G219400.1 | Wheat | cytosol | 26.8 | 23.63 |
| KRH59335 | Soybean | cytosol | 10.78 | 21.71 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | EntrezGene:100800991 | MapMan:22.7.1.1 | EMBL:ACUP02007749 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_12G194800 | GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0006886 | GO:GO:0006887 | GO:GO:0006906 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0012505 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 |
| UniProt:I1LU69 | InterPro:IPR000727 | EnsemblPlants:KRH26811 | ProteinID:KRH26811 | ProteinID:KRH26811.1 | PFAM:PF00804 |
| PFAM:PF05739 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF153 | SMART:SM00397 | SMART:SM00503 |
| InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI000233C2CA |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:35659712..35663575
Molecular Weight (calculated)
34488.6 Da
IEP (calculated)
7.628
GRAVY (calculated)
-0.498
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLLTDSFV GEASNGQPAR QSDVEMGQVP RSNSDMGMEA FNKQIHEADK QIDKLSVLLQ KLKEANEESK AVTKASAMKA IKKRMEKDID EVGKIAHGVK
101: TKIEAISRDN LSNRQKPGCE KGTGIDRARM NMTNALTKKF KDLMTEFQTL RQRIQDEYRE VVERRVITVT GTRPDDETID RLIETGNSEQ IFQRAILEAG
201: RGQVVNTVEE IQERHDAVKE IEKKLLDLHQ IYLDMAVLVD AQGEILDNIE SQVNNAVDHV QRGTSALQNA KKLQKNSRKW MCIAIIILLI IVAIIVVGVL
301: KPWKSS
101: TKIEAISRDN LSNRQKPGCE KGTGIDRARM NMTNALTKKF KDLMTEFQTL RQRIQDEYRE VVERRVITVT GTRPDDETID RLIETGNSEQ IFQRAILEAG
201: RGQVVNTVEE IQERHDAVKE IEKKLLDLHQ IYLDMAVLVD AQGEILDNIE SQVNNAVDHV QRGTSALQNA KKLQKNSRKW MCIAIIILLI IVAIIVVGVL
301: KPWKSS
001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQA SHEESKSVTK APAMKAIKKT MEKDVDEVGS IARFIKGKLE
101: ELDRENLANR QKPGCAKGSG VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE TGNSEQIFQK AIQEQGRGQV
201: MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
301: NKSA
101: ELDRENLANR QKPGCAKGSG VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE TGNSEQIFQK AIQEQGRGQV
201: MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
301: NKSA
Arabidopsis Description
SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.