Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- golgi 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH76768 | Soybean | cytosol | 94.98 | 94.98 |
VIT_04s0043g00820.t01 | Wine grape | cytosol | 66.56 | 66.56 |
PGSC0003DMT400009282 | Potato | cytosol, mitochondrion | 66.56 | 66.56 |
VIT_04s0023g01980.t01 | Wine grape | cytosol | 65.89 | 65.89 |
Solyc02g085090.1.1 | Tomato | cytosol | 65.89 | 65.89 |
KRH59335 | Soybean | cytosol | 32.44 | 63.82 |
Bra039622.1-P | Field mustard | cytosol | 57.86 | 60.07 |
CDY46302 | Canola | cytosol | 57.86 | 60.07 |
AT2G18260.1 | Thale cress | cytosol | 59.87 | 58.69 |
KRH43180 | Soybean | cytosol | 50.17 | 58.37 |
CDY29223 | Canola | cytosol | 55.85 | 58.19 |
Bra024476.1-P | Field mustard | cytosol | 55.18 | 57.69 |
CDY20921 | Canola | cytosol | 55.18 | 57.69 |
CDY25157 | Canola | cytosol | 37.79 | 55.94 |
GSMUA_Achr10P... | Banana | cytosol | 46.15 | 50.74 |
KRH08461 | Soybean | cytosol | 45.48 | 42.24 |
KRH70119 | Soybean | cytosol | 44.82 | 42.14 |
KRH41917 | Soybean | cytosol | 42.14 | 41.45 |
KRH10761 | Soybean | cytosol | 40.8 | 40.13 |
KRH21567 | Soybean | cytosol | 40.47 | 39.8 |
KRH72168 | Soybean | cytosol | 40.47 | 39.67 |
KRH32862 | Soybean | cytosol | 39.8 | 38.89 |
KRH70169 | Soybean | cytosol | 17.06 | 34.69 |
KRH72169 | Soybean | cytosol | 37.79 | 33.73 |
KRH32861 | Soybean | mitochondrion | 37.12 | 33.43 |
KRH26811 | Soybean | cytosol | 34.11 | 33.33 |
KRH22542 | Soybean | endoplasmic reticulum, extracellular, mitochondrion | 34.11 | 33.33 |
KRH08507 | Soybean | cytosol | 34.11 | 33.12 |
KRH68016 | Soybean | cytosol | 32.44 | 32.99 |
KRG96271 | Soybean | cytosol, golgi, mitochondrion | 33.11 | 32.89 |
Protein Annotations
Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | EntrezGene:100779708 | MapMan:22.7.1.1 | EMBL:ACUP02006761 | ncoils:Coil |
EnsemblPlantsGene:GLYMA_11G070000 | GO:GO:0000149 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 |
GO:GO:0006886 | GO:GO:0006887 | GO:GO:0006906 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0012505 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 |
UniProt:I1LHU2 | InterPro:IPR000727 | EnsemblPlants:KRH28699 | ProteinID:KRH28699 | ProteinID:KRH28699.1 | PFAM:PF00804 |
PFAM:PF05739 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF123 | SMART:SM00397 | SMART:SM00503 |
InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI000233D6BA |
Description
hypothetical protein
Coordinates
chr11:-:5247674..5249016
Molecular Weight (calculated)
34262.4 Da
IEP (calculated)
5.172
GRAVY (calculated)
-0.376
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLMTKSFL SYVELKKQAR KDLEDDDLDI EAGKLNPTED RSLSQFFQEV EAIKFEMEEI TNLLFDLQQL NEETKCTHGA KVLRGLRDRM ESDMVAVLRK
101: ALIIKAMLEV LDQSNIDNRS LSESYKEGSP IDRTRMSVTN GLRVKLRDMM NDFQSLRDKI LSEHKEDLKR RYYTTTGEVP TEEVMEKMVS GSLKVEFLAG
201: KTDADLGTQV RHEALMDIQR SLNKLHQVFL DMAILVETQG EKLDNIEDNV VNAGNFIHGG TNSLYNANQM KKKNRKWLCW VFAVGLIILL VCIVAMLSS
101: ALIIKAMLEV LDQSNIDNRS LSESYKEGSP IDRTRMSVTN GLRVKLRDMM NDFQSLRDKI LSEHKEDLKR RYYTTTGEVP TEEVMEKMVS GSLKVEFLAG
201: KTDADLGTQV RHEALMDIQR SLNKLHQVFL DMAILVETQG EKLDNIEDNV VNAGNFIHGG TNSLYNANQM KKKNRKWLCW VFAVGLIILL VCIVAMLSS
001: MNDLMTKSFL SYVELKKQAR TDMESDRDLE KGEDFNFDFS PADEENLSGF FQEIETIKTL IEEITHLLLD LQNLNEETKS THSTKILRGL RDRMESNIVT
101: ISRKANTVKT LIETLEKRNV ANRTSFKEGS CVDRTRTSIT NGVRKKLRDT MSEFHRLRER IFADYREDLK RKYFLATGEE PSNEDMEKMI SGSGSCSDLV
201: KTFEVKPEMD LKTKERHEAV NDIKRSLNRL HQVFLDMAVL VETQGDRIDD IEANVANAGS FVSGGTNSLY YANQMKKKTK SWVLWVSILG VLILLVCVIS
301: MLASR
101: ISRKANTVKT LIETLEKRNV ANRTSFKEGS CVDRTRTSIT NGVRKKLRDT MSEFHRLRER IFADYREDLK RKYFLATGEE PSNEDMEKMI SGSGSCSDLV
201: KTFEVKPEMD LKTKERHEAV NDIKRSLNRL HQVFLDMAVL VETQGDRIDD IEANVANAGS FVSGGTNSLY YANQMKKKTK SWVLWVSILG VLILLVCVIS
301: MLASR
Arabidopsis Description
SYP112SYP112 [Source:UniProtKB/TrEMBL;Acc:A0A178VPA2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.