CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28699	Soybean	cytosol	94.98	94.98
PGSC0003DMT400009282	Potato	cytosol, mitochondrion	67.22	67.22
VIT_04s0043g00820.t01	Wine grape	cytosol	66.89	66.89
Solyc02g085090.1.1	Tomato	cytosol	66.56	66.56
VIT_04s0023g01980.t01	Wine grape	cytosol	66.22	66.22
KRH59335	Soybean	cytosol	32.44	63.82
AT2G18260.1	Thale cress	cytosol	61.87	60.66
CDY46302	Canola	cytosol	57.53	59.72
Bra039622.1-P	Field mustard	cytosol	57.53	59.72
CDY29223	Canola	cytosol	56.86	59.23
CDY20921	Canola	cytosol	56.19	58.74
Bra024476.1-P	Field mustard	cytosol	56.19	58.74
KRH43180	Soybean	cytosol	49.83	57.98
CDY25157	Canola	cytosol	37.79	55.94
GSMUA_Achr10P...	Banana	cytosol	47.83	52.57
KRH08461	Soybean	cytosol	46.15	42.86
KRH70119	Soybean	cytosol	45.48	42.77
KRH41917	Soybean	cytosol	42.14	41.45
KRH10761	Soybean	cytosol	40.47	39.8
KRH21567	Soybean	cytosol	40.13	39.47
KRH72168	Soybean	cytosol	39.8	39.02
KRH32862	Soybean	cytosol	39.13	38.24
KRH70169	Soybean	cytosol	17.06	34.69
KRH72169	Soybean	cytosol	37.79	33.73
KRH32861	Soybean	mitochondrion	37.12	33.43
KRH26811	Soybean	cytosol	33.44	32.68
KRH68016	Soybean	cytosol	32.11	32.65
KRG96271	Soybean	cytosol, golgi, mitochondrion	32.78	32.56
KRH08507	Soybean	cytosol	33.44	32.47
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	33.11	32.35

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	EntrezGene:100797359	MapMan:22.7.1.1	EMBL:ACUP02000642	ncoils:Coil
EnsemblPlantsGene:GLYMA_01G173100	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006810
GO:GO:0006886	GO:GO:0006887	GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0012505
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0031201	GO:GO:0048278
UniProt:I1J8T7	InterPro:IPR000727	EnsemblPlants:KRH76768	ProteinID:KRH76768	ProteinID:KRH76768.1	PFAM:PF00804
PFAM:PF05739	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF123	SMART:SM00397	SMART:SM00503
InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI00023BDE41
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:51036938..51038214

Molecular Weight (calculated)

34175.3 Da

IEP (calculated)

5.321

GRAVY (calculated)

-0.360

Length

299 amino acids

Sequence
(BLAST)

001: MNDLMTKSFL SYVELKKQAR KDLEDDDLDL EAGKLNPTED RNLSQFFQEV EAIKVEMEEI SNLLFDLQQL NEEAKCTHGA KVLRGLRDRM ESDMVAVLRK
101: ARTIKAMLEV LDQSNIANRS LSESYKEGSP IDRTRMSVTN GLRVKLRDMM NDFLSLRDKI LSDHKEDLKR RYYTATGEVP TEEVMEKMVS GSLKVEFLAG
201: KTDADLGTQV RHEAVMDIQR SLNKLHQVFL DMAILVETQG EKLDNIEDNV VNAGNFIHGG TNSLYYADQM KKKNRKWLCW VFAVGLIILL VCIIAMLSS

Best Arabidopsis Sequence Match ( AT2G18260.1 )
(BLAST)

001: MNDLMTKSFL SYVELKKQAR TDMESDRDLE KGEDFNFDFS PADEENLSGF FQEIETIKTL IEEITHLLLD LQNLNEETKS THSTKILRGL RDRMESNIVT
101: ISRKANTVKT LIETLEKRNV ANRTSFKEGS CVDRTRTSIT NGVRKKLRDT MSEFHRLRER IFADYREDLK RKYFLATGEE PSNEDMEKMI SGSGSCSDLV
201: KTFEVKPEMD LKTKERHEAV NDIKRSLNRL HQVFLDMAVL VETQGDRIDD IEANVANAGS FVSGGTNSLY YANQMKKKTK SWVLWVSILG VLILLVCVIS
301: MLASR

Arabidopsis Description

SYP112SYP112 [Source:UniProtKB/TrEMBL;Acc:A0A178VPA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.