CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59335	Soybean	cytosol	39.69	67.11
KRH28699	Soybean	cytosol	58.37	50.17
KRH76768	Soybean	cytosol	57.98	49.83
VIT_04s0043g00820.t01	Wine grape	cytosol	45.91	39.46
VIT_04s0023g01980.t01	Wine grape	cytosol	45.53	39.13
PGSC0003DMT400009282	Potato	cytosol, mitochondrion	44.75	38.46
Solyc02g085090.1.1	Tomato	cytosol	44.36	38.13
AT2G18260.1	Thale cress	cytosol	43.58	36.72
CDY46302	Canola	cytosol	40.47	36.11
Bra039622.1-P	Field mustard	cytosol	40.47	36.11
CDY20921	Canola	cytosol	38.91	34.97
CDY29223	Canola	cytosol	38.91	34.84
Bra024476.1-P	Field mustard	cytosol	38.13	34.27
CDY25157	Canola	cytosol	25.29	32.18
GSMUA_Achr10P...	Banana	cytosol	33.85	31.99
KRH72168	Soybean	cytosol	32.68	27.54
KRH70119	Soybean	cytosol	33.85	27.36
KRH08461	Soybean	cytosol	33.85	27.02
KRH32862	Soybean	cytosol	31.91	26.8
KRH41917	Soybean	cytosol	31.13	26.32
KRH10761	Soybean	cytosol	29.57	25.0
KRH21567	Soybean	cytosol	29.18	24.67
KRH08507	Soybean	cytosol	28.79	24.03
KRH72169	Soybean	cytosol	29.96	22.99
KRH32861	Soybean	mitochondrion	29.18	22.59
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	26.85	22.55
KRH26811	Soybean	cytosol	26.46	22.22
KRH70169	Soybean	cytosol	12.45	21.77
KRG96271	Soybean	cytosol, golgi, mitochondrion	24.9	21.26
KRH68016	Soybean	cytosol	24.12	21.09

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:35.1	UniProt:A0A0R0ILG9	EMBL:ACUP02004848	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G135500	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006810
GO:GO:0006886	GO:GO:0006887	GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0012505
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0031201	GO:GO:0048278
InterPro:IPR000727	EnsemblPlants:KRH43180	ProteinID:KRH43180	ProteinID:KRH43180.1	PFAM:PF00804	PFscan:PS50192
PANTHER:PTHR19957	PANTHER:PTHR19957:SF123	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin_N
TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI0006ED4E24	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:10379053..10379968

Molecular Weight (calculated)

29621.9 Da

IEP (calculated)

4.728

GRAVY (calculated)

-0.173

Length

257 amino acids

Sequence
(BLAST)

001: MTKSFQSYAE LKKQAEKDDL EDSHDIEAGK LDKPTEDHNH LSQFFQEVEA IKVEIEEIAN LLLDLLQLHE EDRMVSDMVA LFCKARIIKS RLEVIDQSNI
101: TNRTLSESYI EVTQIRMSVT NGLRAKLRVM LMHGFQSLRD KFLMEKMISR SLKVEFMVAA AGKTDIDNAD LGVRHEEVIM DIQRSLNMLD QIFVDIAILV
201: ETQGENLDSI EDRVASVVNN ANQMKRKNTN TEWLCWVLVV MLLTVFLYWG RNLEGVV

Best Arabidopsis Sequence Match ( AT2G18260.1 )
(BLAST)

001: MNDLMTKSFL SYVELKKQAR TDMESDRDLE KGEDFNFDFS PADEENLSGF FQEIETIKTL IEEITHLLLD LQNLNEETKS THSTKILRGL RDRMESNIVT
101: ISRKANTVKT LIETLEKRNV ANRTSFKEGS CVDRTRTSIT NGVRKKLRDT MSEFHRLRER IFADYREDLK RKYFLATGEE PSNEDMEKMI SGSGSCSDLV
201: KTFEVKPEMD LKTKERHEAV NDIKRSLNRL HQVFLDMAVL VETQGDRIDD IEANVANAGS FVSGGTNSLY YANQMKKKTK SWVLWVSILG VLILLVCVIS
301: MLASR

Arabidopsis Description

SYP112SYP112 [Source:UniProtKB/TrEMBL;Acc:A0A178VPA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.