Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005968.1-P | Field mustard | cytosol | 91.11 | 94.41 |
| Bra009318.1-P | Field mustard | cytosol | 90.48 | 94.06 |
| Bra028672.1-P | Field mustard | cytosol | 87.94 | 91.42 |
| Solyc01g056810.2.1 | Tomato | cytosol | 64.76 | 80.63 |
| Solyc10g081580.1.1 | Tomato | cytosol, plastid | 74.6 | 75.81 |
| PGSC0003DMT400072284 | Potato | cytosol | 74.29 | 75.48 |
| AT3G03800.1 | Thale cress | cytosol | 71.11 | 73.2 |
| GSMUA_Achr2P01540_001 | Banana | cytosol | 64.44 | 68.12 |
| GSMUA_Achr2P17410_001 | Banana | cytosol | 63.49 | 67.8 |
| TraesCS2B01G263700.1 | Wheat | cytosol | 63.49 | 66.23 |
| TraesCS2D01G248900.1 | Wheat | cytosol | 63.49 | 66.23 |
| TraesCS7B01G394300.1 | Wheat | cytosol | 63.81 | 66.12 |
| EER98026 | Sorghum | cytosol | 63.49 | 66.01 |
| Zm00001d007902_P001 | Maize | mitochondrion, plasma membrane | 63.17 | 65.46 |
| TraesCS7A01G481800.1 | Wheat | cytosol | 62.54 | 64.8 |
| HORVU6Hr1G095330.1 | Barley | cytosol | 61.59 | 64.45 |
| Os06t0168500-01 | Rice | plasma membrane | 61.27 | 63.28 |
| HORVU5Hr1G026120.1 | Barley | cytosol | 61.27 | 63.07 |
| TraesCS5B01G034800.1 | Wheat | cytosol | 60.0 | 62.38 |
| TraesCS5A01G096800.1 | Wheat | cytosol | 60.0 | 61.76 |
| TraesCS5D01G109500.1 | Wheat | cytosol | 60.0 | 61.76 |
| TraesCS5B01G102700.1 | Wheat | cytosol | 59.68 | 61.44 |
| EES16084 | Sorghum | cytosol | 59.37 | 60.91 |
| Zm00001d041716_P002 | Maize | cytosol | 61.27 | 60.88 |
| TraesCS5B01G035600.1 | Wheat | cytosol | 59.37 | 60.52 |
| GSMUA_Achr7P16680_001 | Banana | plasma membrane | 70.79 | 59.63 |
| TraesCS2A01G246600.1 | Wheat | cytosol | 62.86 | 59.46 |
| HORVU2Hr1G057350.2 | Barley | cytosol | 61.59 | 58.97 |
| Zm00001d018867_P002 | Maize | plastid | 64.13 | 51.66 |
| AT1G11250.1 | Thale cress | cytosol | 43.81 | 46.31 |
| AT4G03330.1 | Thale cress | cytosol | 44.44 | 45.9 |
| AT1G61290.2 | Thale cress | cytosol | 42.54 | 44.22 |
| AT3G11820.1 | Thale cress | cytosol, nucleus, plastid | 48.57 | 44.22 |
| AT3G52400.1 | Thale cress | cytosol | 46.98 | 43.4 |
| AT1G08560.1 | Thale cress | cytosol | 37.14 | 37.74 |
| AT2G18260.1 | Thale cress | cytosol | 30.48 | 31.48 |
| TraesCS1A01G088800.1 | Wheat | cytosol | 27.94 | 30.66 |
| TraesCS5A01G240200.3 | Wheat | mitochondrion | 20.0 | 28.51 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.1 | EntrezGene:830702 | ProteinID:AED91244.1 | ArrayExpress:AT5G08080 |
| EnsemblPlantsGene:AT5G08080 | RefSeq:AT5G08080 | TAIR:AT5G08080 | RefSeq:AT5G08080-TAIR-G | EnsemblPlants:AT5G08080.3 | TAIR:AT5G08080.3 |
| Unigene:At.27182 | ncoils:Coil | UniProt:F4K9K2 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0005802 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009504 |
| GO:GO:0009506 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0061025 | InterPro:IPR000727 | RefSeq:NP_001190256.1 | PFAM:PF00804 |
| PFAM:PF05739 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF153 | SMART:SM00397 | SMART:SM00503 |
| InterPro:SNARE | SUPFAM:SSF47661 | Symbol:SYP132 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix |
| InterPro:T_SNARE_dom | UniParc:UPI0001E93089 | SEG:seg | : | : | : |
Description
SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
Coordinates
chr5:+:2588342..2591316
Molecular Weight (calculated)
35404.5 Da
IEP (calculated)
5.921
GRAVY (calculated)
-0.520
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQI YDSVASQLPC ASHEESKSVT KAPAMKAIKK TMEKDVDEVG
101: SIARFIKGKL EELDRENLAN RQKPGCAKGS GVDRSRTATT LSLKKKLKDK MAEFQVLREN IQQEYRDVVD RRVYTVTGER ADEDTIDELI ETGNSEQIFQ
201: KAIQEQGRGQ VMDTLAEIQE RHDAVRDLEK KLLDLQQIFL DMAVLVDAQG EMLDNIESQV SSAVDHVQSG NTALQRAKSL QKNSRKWMCI AIIILLIVVA
301: VIVVGVLKPW KNKSA
101: SIARFIKGKL EELDRENLAN RQKPGCAKGS GVDRSRTATT LSLKKKLKDK MAEFQVLREN IQQEYRDVVD RRVYTVTGER ADEDTIDELI ETGNSEQIFQ
201: KAIQEQGRGQ VMDTLAEIQE RHDAVRDLEK KLLDLQQIFL DMAVLVDAQG EMLDNIESQV SSAVDHVQSG NTALQRAKSL QKNSRKWMCI AIIILLIVVA
301: VIVVGVLKPW KNKSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.