Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G096800.1 | Wheat | cytosol | 97.39 | 97.39 |
| TraesCS5D01G109500.1 | Wheat | cytosol | 96.73 | 96.73 |
| HORVU5Hr1G026120.1 | Barley | cytosol | 93.79 | 93.79 |
| Os06t0168500-01 | Rice | plasma membrane | 83.33 | 83.61 |
| EES16084 | Sorghum | cytosol | 80.39 | 80.13 |
| Zm00001d041716_P002 | Maize | cytosol | 81.05 | 78.23 |
| Solyc01g056810.2.1 | Tomato | cytosol | 55.88 | 67.59 |
| Bra005968.1-P | Field mustard | cytosol | 62.42 | 62.83 |
| Bra009318.1-P | Field mustard | cytosol | 62.09 | 62.71 |
| Bra028672.1-P | Field mustard | cytosol | 61.44 | 62.05 |
| KRH08507 | Soybean | cytosol | 62.09 | 61.69 |
| CDY21160 | Canola | cytosol | 26.8 | 61.65 |
| CDY51747 | Canola | cytosol | 27.12 | 61.48 |
| PGSC0003DMT400072284 | Potato | cytosol | 62.09 | 61.29 |
| VIT_08s0032g00440.t01 | Wine grape | cytosol | 61.44 | 61.24 |
| Solyc10g081580.1.1 | Tomato | cytosol, plastid | 61.76 | 60.97 |
| CDY50666 | Canola | cytosol | 26.8 | 60.74 |
| TraesCS2B01G244700.1 | Wheat | cytosol | 59.15 | 59.74 |
| AT5G08080.3 | Thale cress | cytosol | 61.44 | 59.68 |
| GSMUA_Achr2P17410_001 | Banana | cytosol | 57.52 | 59.66 |
| AT3G03800.1 | Thale cress | cytosol | 58.82 | 58.82 |
| TraesCS2B01G263700.1 | Wheat | cytosol | 57.84 | 58.61 |
| TraesCS7B01G394300.1 | Wheat | cytosol | 57.19 | 57.57 |
| KRH70169 | Soybean | cytosol | 27.45 | 57.14 |
| CDY29963 | Canola | cytosol | 56.86 | 56.13 |
| Bra031972.1-P | Field mustard | cytosol | 50.65 | 55.36 |
| GSMUA_Achr7P16680_001 | Banana | plasma membrane | 66.67 | 54.55 |
| TraesCS5B01G034800.1 | Wheat | cytosol | 53.59 | 54.13 |
| CDY51748 | Canola | cytosol | 31.05 | 53.67 |
| Bra036431.1-P | Field mustard | cytosol | 48.69 | 53.6 |
| CDY50665 | Canola | cytosol | 30.07 | 52.87 |
| TraesCS5B01G035600.1 | Wheat | cytosol | 52.94 | 52.43 |
| CDY21161 | Canola | cytosol | 30.07 | 51.4 |
| TraesCS6B01G211000.1 | Wheat | cytosol | 44.12 | 44.26 |
| TraesCS7B01G260100.1 | Wheat | cytosol | 43.46 | 43.46 |
| TraesCS4B01G067100.1 | Wheat | cytosol | 22.55 | 42.33 |
| TraesCS5B01G427600.1 | Wheat | cytosol, golgi, nucleus | 43.46 | 41.56 |
| TraesCS4B01G067200.1 | Wheat | cytosol | 33.66 | 32.8 |
| TraesCS2B01G238200.2 | Wheat | cytosol | 28.1 | 27.92 |
| TraesCS6B01G175300.1 | Wheat | cytosol | 22.55 | 22.55 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005484 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | InterPro:IPR000727 | PFAM:PF00804 |
| PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF153 | SMART:SM00397 |
| SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix |
| InterPro:T_SNARE_dom | EnsemblPlantsGene:TraesCS5B01G102700 | EnsemblPlants:TraesCS5B01G102700.1 | TIGR:cd00179 | TIGR:cd15848 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:136431092..136434164
Molecular Weight (calculated)
35035.2 Da
IEP (calculated)
5.933
GRAVY (calculated)
-0.484
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNLLSNSFE LNKEERPPGN VDIELGLQGD VSGSAQPGFD GFYEQVMEIE KLLETLTKLL KDLQNSNEES KVVTKASAMK DIKRRMEKDV NEVTKVARLT
101: KSKLQQLNKE NLANREKPGF HKGSSVDRSR TSVTITLTTR LRERISEFQT LREAIQTEYR EVVERRVFTV TGERADEETI DKLIETGDSE QIFQRAIQEQ
201: GRGRVLDTLQ EIQERHDTVK EIETKLLELQ QIFLDLSVLV EAQGEILNNI EAQVTGAVEH VQTGTNLLQK ARVLQKNTRK WTCIAIIILL IIVLVIVLSL
301: RPWEKK
101: KSKLQQLNKE NLANREKPGF HKGSSVDRSR TSVTITLTTR LRERISEFQT LREAIQTEYR EVVERRVFTV TGERADEETI DKLIETGDSE QIFQRAIQEQ
201: GRGRVLDTLQ EIQERHDTVK EIETKLLELQ QIFLDLSVLV EAQGEILNNI EAQVTGAVEH VQTGTNLLQK ARVLQKNTRK WTCIAIIILL IIVLVIVLSL
301: RPWEKK
001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
Arabidopsis Description
SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.