Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51748 | Canola | cytosol | 92.18 | 93.22 |
| CDY50665 | Canola | cytosol | 89.94 | 92.53 |
| KRH70169 | Soybean | cytosol | 55.31 | 67.35 |
| CDY29963 | Canola | cytosol | 96.65 | 55.81 |
| AT3G03800.1 | Thale cress | cytosol | 90.5 | 52.94 |
| KRH08507 | Soybean | cytosol | 68.72 | 39.94 |
| VIT_08s0032g00440.t01 | Wine grape | cytosol | 68.16 | 39.74 |
| Solyc10g081580.1.1 | Tomato | cytosol, plastid | 67.04 | 38.71 |
| PGSC0003DMT400072284 | Potato | cytosol | 67.04 | 38.71 |
| Solyc01g056810.2.1 | Tomato | cytosol | 49.72 | 35.18 |
| TraesCS2B01G263700.1 | Wheat | cytosol | 56.42 | 33.44 |
| TraesCS2D01G248900.1 | Wheat | cytosol | 56.42 | 33.44 |
| EER98026 | Sorghum | cytosol | 56.42 | 33.33 |
| Zm00001d007902_P001 | Maize | mitochondrion, plasma membrane | 56.42 | 33.22 |
| GSMUA_Achr2P01540_001 | Banana | cytosol | 54.19 | 32.55 |
| TraesCS7A01G481800.1 | Wheat | cytosol | 54.75 | 32.24 |
| TraesCS7B01G394300.1 | Wheat | cytosol | 54.75 | 32.24 |
| HORVU5Hr1G026120.1 | Barley | cytosol | 53.63 | 31.37 |
| HORVU6Hr1G095330.1 | Barley | cytosol | 52.51 | 31.23 |
| Os06t0168500-01 | Rice | plasma membrane | 53.07 | 31.15 |
| HORVU2Hr1G057350.2 | Barley | cytosol | 56.42 | 30.7 |
| TraesCS5B01G034800.1 | Wheat | cytosol | 51.96 | 30.69 |
| TraesCS5B01G035600.1 | Wheat | cytosol | 52.51 | 30.42 |
| TraesCS5D01G109500.1 | Wheat | cytosol | 51.4 | 30.07 |
| TraesCS5B01G102700.1 | Wheat | cytosol | 51.4 | 30.07 |
| TraesCS5A01G096800.1 | Wheat | cytosol | 51.4 | 30.07 |
| EES16084 | Sorghum | cytosol | 51.4 | 29.97 |
| TraesCS2A01G246600.1 | Wheat | cytosol | 55.31 | 29.73 |
| Zm00001d041716_P002 | Maize | cytosol | 52.51 | 29.65 |
| GSMUA_Achr7P16680_001 | Banana | plasma membrane | 61.45 | 29.41 |
| GSMUA_Achr2P17410_001 | Banana | cytosol | 48.04 | 29.15 |
| Zm00001d018867_P002 | Maize | plastid | 56.98 | 26.09 |
| TraesCS5A01G240200.3 | Wheat | mitochondrion | 29.05 | 23.53 |
| CDY21958 | Canola | cytosol | 38.55 | 22.62 |
| CDY48554 | Canola | cytosol | 37.99 | 22.3 |
| CDY70107 | Canola | cytosol | 36.31 | 21.81 |
| CDY20986 | Canola | cytosol | 35.75 | 21.48 |
| CDY34656 | Canola | cytosol | 35.75 | 21.48 |
| CDY34843 | Canola | cytosol | 35.75 | 21.48 |
| CDY19350 | Canola | cytosol | 35.2 | 21.14 |
| CDX97943 | Canola | cytosol | 35.2 | 21.14 |
| CDY01061 | Canola | cytosol, plastid | 36.87 | 19.7 |
| CDY08492 | Canola | cytosol | 36.87 | 19.47 |
| CDY23212 | Canola | cytosol | 36.87 | 19.24 |
| CDX90604 | Canola | cytosol, golgi, nucleus | 35.75 | 19.16 |
| CDY70958 | Canola | cytosol | 35.2 | 18.92 |
| CDX93553 | Canola | cytosol | 32.4 | 18.89 |
| CDX73851 | Canola | cytosol | 35.2 | 18.86 |
| CDY29079 | Canola | cytosol, golgi, nucleus | 35.2 | 18.75 |
| CDX95050 | Canola | cytosol | 31.84 | 18.57 |
| CDX97497 | Canola | cytosol | 31.28 | 18.48 |
| CDY31137 | Canola | cytosol | 31.28 | 18.42 |
| CDY46302 | Canola | cytosol | 27.93 | 17.36 |
| CDY29223 | Canola | cytosol | 26.82 | 16.72 |
| CDY20921 | Canola | cytosol | 25.7 | 16.08 |
| CDY25157 | Canola | cytosol | 16.76 | 14.85 |
| TraesCS1A01G088800.1 | Wheat | cytosol | 17.32 | 10.8 |
| CDX95336 | Canola | cytosol | 0.56 | 0.95 |
| CDY21160 | Canola | cytosol | 0.56 | 0.75 |
| CDY51747 | Canola | cytosol | 0.56 | 0.74 |
| CDY50666 | Canola | cytosol | 0.56 | 0.74 |
Protein Annotations
| EnsemblPlants:CDY21161 | EnsemblPlantsGene:GSBRNA2T00015351001 | Gene3D:1.20.58.70 | GO:A0A078G6U7 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | InterPro:SNARE | InterPro:Syntaxin_N | ncoils:Coil |
| PANTHER:PTHR19957 | PANTHER:PTHR19957:SF144 | PFAM:PF00804 | ProteinID:CDY21161 | ProteinID:CDY21161.1 | SEG:seg |
| SMART:SM00503 | SUPFAM:SSF47661 | UniParc:UPI0004EDAE90 | UniProt:A0A078G6U7 | MapMan:22.7.1.1 | : |
Description
BnaA01g33920DBnaA01g33920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6U7]
Coordinates
chrLK032116:-:359802..361255
Molecular Weight (calculated)
20317.0 Da
IEP (calculated)
10.119
GRAVY (calculated)
-1.014
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLLKGSSE FSRDRSNRSD IESAHGPGNS GDLGLAGFFK KVGEIDSQYE KLDKHLKKLQ AAHEETKAVT KGPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RSKPGCGKGT GVDRTRAATT IAIKKKFKDK ISEFQTLRQN IHQEYREVVE RRVFTVTGQR ADEEARTYS
101: EELDRENLEN RSKPGCGKGT GVDRTRAATT IAIKKKFKDK ISEFQTLRQN IHQEYREVVE RRVFTVTGQR ADEEARTYS
001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
Arabidopsis Description
SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.