Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019872.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY19350 | Canola | cytosol | 99.66 | 99.66 |
| CDY20986 | Canola | cytosol | 97.65 | 97.65 |
| CDY70107 | Canola | cytosol | 96.64 | 96.64 |
| CDY34656 | Canola | cytosol | 95.97 | 95.97 |
| CDY34843 | Canola | cytosol | 95.64 | 95.64 |
| AT1G11250.1 | Thale cress | cytosol | 94.97 | 94.97 |
| KRH10761 | Soybean | cytosol | 78.19 | 76.64 |
| KRH21567 | Soybean | cytosol | 77.52 | 75.99 |
| KRH41917 | Soybean | cytosol | 77.52 | 75.99 |
| VIT_12s0059g02060.t01 | Wine grape | cytosol | 75.5 | 73.77 |
| PGSC0003DMT400035739 | Potato | cytosol | 73.49 | 70.65 |
| Solyc12g005580.1.1 | Tomato | cytosol | 73.15 | 70.32 |
| PGSC0003DMT400055777 | Potato | cytosol | 72.15 | 69.13 |
| CDY48554 | Canola | cytosol | 67.79 | 66.23 |
| Zm00001d036931_P001 | Maize | cytosol | 68.46 | 66.02 |
| CDY21958 | Canola | cytosol | 67.45 | 65.9 |
| Zm00001d046482_P001 | Maize | cytosol | 68.12 | 65.7 |
| EER89986 | Sorghum | cytosol | 67.79 | 65.37 |
| GSMUA_Achr6P04820_001 | Banana | cytosol | 55.7 | 65.35 |
| GSMUA_Achr10P... | Banana | cytosol | 60.74 | 64.87 |
| TraesCS6B01G211000.1 | Wheat | cytosol | 65.44 | 63.93 |
| TraesCS7B01G260100.1 | Wheat | cytosol | 65.44 | 63.73 |
| TraesCS6D01G169800.1 | Wheat | cytosol | 65.1 | 63.61 |
| TraesCS7A01G368400.1 | Wheat | cytosol | 64.43 | 62.75 |
| Os02t0209900-01 | Rice | cytosol | 65.1 | 62.38 |
| TraesCS7D01G354500.1 | Wheat | cytosol | 63.76 | 62.09 |
| EES06503 | Sorghum | cytosol | 63.42 | 60.0 |
| Zm00001d053607_P001 | Maize | cytosol | 62.08 | 59.11 |
| CDY70958 | Canola | cytosol | 60.4 | 54.05 |
| CDX73851 | Canola | cytosol | 60.07 | 53.59 |
| CDY01061 | Canola | cytosol, plastid | 60.07 | 53.43 |
| CDY08492 | Canola | cytosol | 59.73 | 52.51 |
| TraesCS6A01G182200.1 | Wheat | cytosol | 65.77 | 51.85 |
| CDY21160 | Canola | cytosol | 22.82 | 51.13 |
| CDY51747 | Canola | cytosol | 22.48 | 49.63 |
| CDY50666 | Canola | cytosol | 22.48 | 49.63 |
| CDY23212 | Canola | cytosol | 55.7 | 48.4 |
| CDX90604 | Canola | cytosol, golgi, nucleus | 52.35 | 46.71 |
| CDY29079 | Canola | cytosol, golgi, nucleus | 52.35 | 46.43 |
| CDX97497 | Canola | cytosol | 43.62 | 42.9 |
| CDY31137 | Canola | cytosol | 43.62 | 42.76 |
| CDX93553 | Canola | cytosol | 43.62 | 42.35 |
| CDX95050 | Canola | cytosol | 43.29 | 42.02 |
| CDY29963 | Canola | cytosol | 43.62 | 41.94 |
| CDY51748 | Canola | cytosol | 21.81 | 36.72 |
| CDX95336 | Canola | cytosol | 12.75 | 36.19 |
| CDY50665 | Canola | cytosol | 20.81 | 35.63 |
| CDY21161 | Canola | cytosol | 21.14 | 35.2 |
| CDY20921 | Canola | cytosol | 33.56 | 34.97 |
| CDY46302 | Canola | cytosol | 33.56 | 34.72 |
| HORVU7Hr1G085550.1 | Barley | cytosol | 36.58 | 34.6 |
| CDY29223 | Canola | cytosol | 33.22 | 34.49 |
| CDY25157 | Canola | cytosol | 23.15 | 34.16 |
| HORVU6Hr1G038490.4 | Barley | nucleus | 35.91 | 33.97 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.1 | GO:A0A078EEZ3 | EnsemblPlants:CDX97943 | ProteinID:CDX97943 |
| ProteinID:CDX97943.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016043 | GO:GO:0016192 | GO:GO:0061025 | EnsemblPlantsGene:GSBRNA2T00105291001 | InterPro:IPR000727 | PFAM:PF00804 |
| PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF198 | SMART:SM00397 |
| SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix |
| InterPro:T_SNARE_dom | UniParc:UPI000253EB0D | SEG:seg | : | : | : |
Description
BnaA06g06940D
Coordinates
chrLK031902:+:168497..169466
Molecular Weight (calculated)
33970.7 Da
IEP (calculated)
6.087
GRAVY (calculated)
-0.548
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLFSNSFK RNQAQMSDVE AGQETMNLDK FFEDVENVKD DMKGVETLYK KLQDSNEECQ TVHNAKKVKE LRAKMDADVG QVLKRVKIIK QKLEALEKAN
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQSL RARMNDEYKE TVERRYFTIT GEKADEQTID NLIASGESEN FLQKAIQEQG RGEIMDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV VFILLLIPVM PHIMLMLK
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQSL RARMNDEYKE TVERRYFTIT GEKADEQTID NLIASGESEN FLQKAIQEQG RGEIMDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV VFILLLIPVM PHIMLMLK
001: MNDLFSNSFK KNQAQLGDVE AGQETMNLDK FFEDVENVKD DMKGVEALYK KLQDSNEECK TVHNAKKVKE LRAKMDGDVA MVLKRVKIIK QKLEALEKAN
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQGL RARMNNEYKE TVERRYFTIT GEKADEQTID NLIASGESEN FLQKAIQEQG RGQILDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV IFILLLIPLL PHIMLMLK
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQGL RARMNNEYKE TVERRYFTIT GEKADEQTID NLIASGESEN FLQKAIQEQG RGQILDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV IFILLLIPLL PHIMLMLK
Arabidopsis Description
SYP125Syntaxin-125 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.