Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70107 | Canola | cytosol | 98.99 | 98.99 |
| CDY34656 | Canola | cytosol | 98.32 | 98.32 |
| CDY34843 | Canola | cytosol | 97.99 | 97.99 |
| CDY19350 | Canola | cytosol | 97.99 | 97.99 |
| CDX97943 | Canola | cytosol | 97.65 | 97.65 |
| AT1G11250.1 | Thale cress | cytosol | 95.97 | 95.97 |
| KRH10761 | Soybean | cytosol | 78.86 | 77.3 |
| KRH21567 | Soybean | cytosol | 78.19 | 76.64 |
| KRH41917 | Soybean | cytosol | 78.19 | 76.64 |
| VIT_12s0059g02060.t01 | Wine grape | cytosol | 75.84 | 74.1 |
| PGSC0003DMT400035739 | Potato | cytosol | 73.83 | 70.97 |
| Solyc12g005580.1.1 | Tomato | cytosol | 73.49 | 70.65 |
| PGSC0003DMT400055777 | Potato | cytosol | 72.48 | 69.45 |
| CDY48554 | Canola | cytosol | 68.46 | 66.89 |
| CDY21958 | Canola | cytosol | 68.12 | 66.56 |
| Zm00001d036931_P001 | Maize | cytosol | 68.79 | 66.34 |
| Zm00001d046482_P001 | Maize | cytosol | 68.46 | 66.02 |
| GSMUA_Achr6P04820_001 | Banana | cytosol | 56.04 | 65.75 |
| EER89986 | Sorghum | cytosol | 68.12 | 65.7 |
| GSMUA_Achr10P... | Banana | cytosol | 61.07 | 65.23 |
| TraesCS6B01G211000.1 | Wheat | cytosol | 66.44 | 64.92 |
| TraesCS6D01G169800.1 | Wheat | cytosol | 66.11 | 64.59 |
| TraesCS7B01G260100.1 | Wheat | cytosol | 66.11 | 64.38 |
| TraesCS7A01G368400.1 | Wheat | cytosol | 65.1 | 63.4 |
| TraesCS7D01G354500.1 | Wheat | cytosol | 64.43 | 62.75 |
| Os02t0209900-01 | Rice | cytosol | 65.44 | 62.7 |
| EES06503 | Sorghum | cytosol | 63.76 | 60.32 |
| Zm00001d053607_P001 | Maize | cytosol | 62.75 | 59.74 |
| CDY70958 | Canola | cytosol | 60.74 | 54.35 |
| CDX73851 | Canola | cytosol | 60.4 | 53.89 |
| CDY01061 | Canola | cytosol, plastid | 60.07 | 53.43 |
| TraesCS6A01G182200.1 | Wheat | cytosol | 66.78 | 52.65 |
| CDY08492 | Canola | cytosol | 59.73 | 52.51 |
| CDY21160 | Canola | cytosol | 22.82 | 51.13 |
| CDY51747 | Canola | cytosol | 22.82 | 50.37 |
| CDY50666 | Canola | cytosol | 22.82 | 50.37 |
| CDY23212 | Canola | cytosol | 56.04 | 48.69 |
| CDX90604 | Canola | cytosol, golgi, nucleus | 52.68 | 47.01 |
| CDY29079 | Canola | cytosol, golgi, nucleus | 52.68 | 46.73 |
| CDX97497 | Canola | cytosol | 43.62 | 42.9 |
| CDY31137 | Canola | cytosol | 43.62 | 42.76 |
| CDX93553 | Canola | cytosol | 43.62 | 42.35 |
| CDY29963 | Canola | cytosol | 43.96 | 42.26 |
| CDX95050 | Canola | cytosol | 43.29 | 42.02 |
| CDY51748 | Canola | cytosol | 22.48 | 37.85 |
| CDY50665 | Canola | cytosol | 21.48 | 36.78 |
| CDX95336 | Canola | cytosol | 12.75 | 36.19 |
| CDY21161 | Canola | cytosol | 21.48 | 35.75 |
| CDY20921 | Canola | cytosol | 34.23 | 35.66 |
| CDY46302 | Canola | cytosol | 34.23 | 35.42 |
| HORVU7Hr1G085550.1 | Barley | cytosol | 37.25 | 35.24 |
| CDY29223 | Canola | cytosol | 33.89 | 35.19 |
| CDY25157 | Canola | cytosol | 23.49 | 34.65 |
| HORVU6Hr1G038490.4 | Barley | nucleus | 36.58 | 34.6 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.1 | GO:A0A078G6A6 | UniProt:A0A078G6A6 | EnsemblPlants:CDY20986 |
| ProteinID:CDY20986 | ProteinID:CDY20986.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 |
| GO:GO:0061025 | EnsemblPlantsGene:GSBRNA2T00015139001 | InterPro:IPR000727 | PFAM:PF00804 | PFAM:PF05739 | ScanProsite:PS00914 |
| PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF198 | SMART:SM00397 | SMART:SM00503 | InterPro:SNARE |
| SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI0004EDF64F |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g25390DBnaA08g25390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6A6]
Coordinates
chrLK032115:+:201768..202929
Molecular Weight (calculated)
33909.6 Da
IEP (calculated)
6.385
GRAVY (calculated)
-0.545
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLFSNSFK RNQAQFGDVE AGQETMNLDK FFEDVENVKD DMKGVETLYK KLQDSNEECK TVHNAKKVKE LRAKMDADVG QVLKRVKIIK QKLEALEKAN
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQSL RARMNDEYKE TVERRYFTIT GEQADEQTID NLIASGESEN FLQKAIQEQG RGQIMDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV VFILLLIPAL PHIMLMLK
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQSL RARMNDEYKE TVERRYFTIT GEQADEQTID NLIASGESEN FLQKAIQEQG RGQIMDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV VFILLLIPAL PHIMLMLK
001: MNDLFSNSFK KNQAQLGDVE AGQETMNLDK FFEDVENVKD DMKGVEALYK KLQDSNEECK TVHNAKKVKE LRAKMDGDVA MVLKRVKIIK QKLEALEKAN
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQGL RARMNNEYKE TVERRYFTIT GEKADEQTID NLIASGESEN FLQKAIQEQG RGQILDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV IFILLLIPLL PHIMLMLK
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQGL RARMNNEYKE TVERRYFTIT GEKADEQTID NLIASGESEN FLQKAIQEQG RGQILDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV IFILLLIPLL PHIMLMLK
Arabidopsis Description
SYP125Syntaxin-125 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.