Factsheet for Zm00001d007902_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98026	Sorghum	cytosol	97.7	98.02
TraesCS2B01G263700.1	Wheat	cytosol	93.09	93.71
TraesCS2D01G248900.1	Wheat	cytosol	93.09	93.71
TraesCS7B01G394300.1	Wheat	cytosol	86.18	86.18
TraesCS7A01G481800.1	Wheat	cytosol	85.53	85.53
HORVU6Hr1G095330.1	Barley	cytosol	84.54	85.38
TraesCS2A01G246600.1	Wheat	cytosol	91.78	83.78
HORVU2Hr1G057350.2	Barley	cytosol	88.49	81.76
TraesCS5B01G034800.1	Wheat	cytosol	79.61	79.87
TraesCS5B01G035600.1	Wheat	cytosol	78.62	77.35
Zm00001d018867_P002	Maize	plastid	97.04	75.45
Solyc01g056810.2.1	Tomato	cytosol	59.87	71.94
VIT_08s0032g00440.t01	Wine grape	cytosol	69.08	68.4
KRH08507	Soybean	cytosol	69.08	68.18
Bra005968.1-P	Field mustard	cytosol	67.43	67.43
Bra009318.1-P	Field mustard	cytosol	67.11	67.33
Solyc10g081580.1.1	Tomato	cytosol, plastid	68.42	67.1
PGSC0003DMT400072284	Potato	cytosol	68.09	66.77
Bra028672.1-P	Field mustard	cytosol	65.79	66.01
GSMUA_Achr2P01540_001	Banana	cytosol	62.83	64.09
AT5G08080.3	Thale cress	cytosol	65.46	63.17
CDY21160	Canola	cytosol	27.3	62.41
KRH70169	Soybean	cytosol	29.61	61.22
AT3G03800.1	Thale cress	cytosol	61.18	60.78
CDY51747	Canola	cytosol	26.97	60.74
Zm00001d041716_P002	Maize	cytosol	62.5	59.94
CDY50666	Canola	cytosol	26.32	59.26
CDY29963	Canola	cytosol	59.87	58.71
Bra036431.1-P	Field mustard	cytosol	52.3	57.19
Bra031972.1-P	Field mustard	cytosol	52.63	57.14
CDY51748	Canola	cytosol	33.22	57.06
CDY50665	Canola	cytosol	32.57	56.9
CDY21161	Canola	cytosol	33.22	56.42
Zm00001d021664_P001	Maize	cytosol	55.92	47.75
Zm00001d034365_P001	Maize	plasma membrane	41.12	40.85
Zm00001d036931_P001	Maize	cytosol	41.45	40.78
Zm00001d046482_P001	Maize	cytosol	41.45	40.78
Zm00001d053607_P001	Maize	cytosol	40.79	39.62
Zm00001d033919_P001	Maize	plasma membrane	37.17	36.1
TraesCS1A01G088800.1	Wheat	cytosol	33.88	35.89
Zm00001d013323_P001	Maize	cytosol	36.84	35.67
TraesCS5A01G240200.3	Wheat	mitochondrion	24.67	33.94
Zm00001d013114_P001	Maize	cytosol, plastid	28.95	30.14
Zm00001d013115_P001	Maize	cytosol	12.83	26.71
Zm00001d035331_P001	Maize	cytosol	25.66	26.17

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	EntrezGene:100283000	MapMan:22.7.1.1	UniProt:B6TDM3	ncoils:Coil
EMBL:EU963088	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0061025	InterPro:IPR000727
ProteinID:ONM27857.1	PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957
PANTHER:PTHR19957:SF153	SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS
InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI000182C163	EnsemblPlantsGene:Zm00001d007902	EnsemblPlants:Zm00001d007902_P001
EnsemblPlants:Zm00001d007902_T001	SEG:seg	:	:	:	:

Description

Syntaxin 132

Coordinates

chr2:+:242054900..242059438

Molecular Weight (calculated)

34568.5 Da

IEP (calculated)

7.628

GRAVY (calculated)

-0.591

Length

304 amino acids

Sequence
(BLAST)

001: MNNLLTDSFE LPRRDSSRDA DIEMGMHQAD ASDNLKDFLK KVDTIESLIA KLTNLLNKLQ TANEESKAVT KASSMKAIKQ RMEKDIDEVG KIARQAKTKV
101: DELEKDNLSN RQKPGCGKGS AVDRSREQTT GAVKKKLKER MDDFQTLREA IRQEYREVVE RRVFTVTGNR PDEETIDDLI ETGKSEQIFK DAIQHQGRGQ
201: ILDTVAEIQE RHDAVRDLER KLLELQQIFM DMAVLVEAQG DMINNIETHV SNATNHIQQG VSALQNAKKL QRNSRKWMCY AIIILLVIVV VIVVAVIQPW
301: KKGT

Best Arabidopsis Sequence Match ( AT5G08080.1 )
(BLAST)

001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQA SHEESKSVTK APAMKAIKKT MEKDVDEVGS IARFIKGKLE
101: ELDRENLANR QKPGCAKGSG VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE TGNSEQIFQK AIQEQGRGQV
201: MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
301: NKSA

Arabidopsis Description

SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.