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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 6
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92620 Canola endoplasmic reticulum 88.17 96.97
CDY03477 Canola endoplasmic reticulum 91.04 96.47
CDY34264 Canola endoplasmic reticulum 90.7 96.11
CDY24830 Canola endoplasmic reticulum 87.94 93.53
CDY08910 Canola endoplasmic reticulum 83.47 92.85
AT4G24190.1 Thale cress endoplasmic reticulum 87.6 92.71
VIT_18s0001g14500.t01 Wine grape endoplasmic reticulum 76.35 81.3
PGSC0003DMT400025743 Potato extracellular 75.2 81.27
Solyc04g081570.2.1 Tomato plastid 75.32 80.79
KRH05964 Soybean endoplasmic reticulum 75.2 80.47
Os06t0716700-02 Rice plasma membrane 74.4 79.8
GSMUA_Achr7P17770_001 Banana endoplasmic reticulum 74.51 79.73
GSMUA_Achr1P07620_001 Banana endoplasmic reticulum 74.4 79.51
Zm00001d036401_P001 Maize plasma membrane 73.25 79.35
KXG20895 Sorghum endoplasmic reticulum 73.13 78.93
Zm00001d014792_P003 Maize plasma membrane 72.33 77.97
KRH17444 Soybean nucleus 75.55 77.69
Zm00001d009931_P001 Maize cytosol 15.5 75.0
TraesCS7D01G517800.1 Wheat golgi, plastid 71.64 74.64
HORVU7Hr1G117000.1 Barley plastid 71.99 69.98
CDY06544 Canola cytosol 7.35 55.65
CDY11961 Canola cytosol 21.81 52.2
CDY27839 Canola cytosol 40.3 49.79
CDY11967 Canola cytosol 32.61 49.31
CDY36772 Canola cytosol 20.44 49.04
CDY36776 Canola cytosol 20.44 49.04
CDY20742 Canola cytosol 29.97 47.37
CDY64982 Canola cytosol 29.85 47.36
CDY36807 Canola cytosol 31.11 47.13
CDY06551 Canola cytosol 30.88 46.95
CDY50296 Canola cytosol 3.33 46.77
CDY11921 Canola cytosol 28.82 46.74
CDY66279 Canola mitochondrion 23.42 46.58
CDY22598 Canola cytosol 25.03 45.89
CDY50297 Canola plastid 32.26 44.18
CDX83528 Canola plastid 37.77 42.02
CDY48069 Canola plastid 37.89 41.93
CDY33122 Canola plastid 37.31 41.51
CDY04167 Canola plastid 35.94 40.97
CDY35962 Canola mitochondrion 37.2 40.35
CDY22132 Canola mitochondrion 36.85 39.93
CDY28017 Canola mitochondrion 35.71 39.52
CDX99788 Canola plastid 30.65 38.81
CDY36775 Canola cytosol 5.86 34.69
CDY36771 Canola cytosol 5.86 34.69
CDY06545 Canola cytosol 2.41 34.43
CDY66280 Canola cytosol 8.61 33.63
CDY11962 Canola cytosol 5.51 33.1
CDY06546 Canola cytosol 2.76 32.43
Protein Annotations
Gene3D:1.20.120.790MapMan:19.1.6.1Gene3D:3.30.230.80Gene3D:3.30.565.10Gene3D:3.30.70.2140Gene3D:3.40.50.11260
GO:A0A078FDC9UniProt:A0A078FDC9EnsemblPlants:CDY10992ProteinID:CDY10992ProteinID:CDY10992.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006457GO:GO:0006950GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0051082EnsemblPlantsGene:GSBRNA2T00048937001InterPro:HATPase_CInterPro:HATPase_C_sfInterPro:HSP90_CInterPro:Heat_shock_protein_90_CS
InterPro:Hsp90_NInterPro:Hsp90_famInterPro:IPR036890InterPro:IPR037196HAMAP:MF_00505PFAM:PF00183
PFAM:PF02518PIRSF:PIRSF002583PRINTS:PR00775ScanProsite:PS00298PANTHER:PTHR11528PANTHER:PTHR11528:SF73
InterPro:Ribosomal_S5_D2-typ_foldSMART:SM00387SUPFAM:SSF110942SUPFAM:SSF54211SUPFAM:SSF55874SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EF1BE5SEG:seg:::
Description
BnaA03g46510DBnaA03g46510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDC9]
Coordinates
chrLK032008:-:546305..549816
Molecular Weight (calculated)
100519.0 Da
IEP (calculated)
4.883
GRAVY (calculated)
-0.605
Length
871 amino acids
Sequence
(BLAST)
001: MRKRTLVSVL FLFSLLFLLP DQGRKLHANA EDSSDEVTDP PKVEEKLGGH SGLSTDSDVV HRESESISKK SLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDTAKLEIQ IKLDKAKKII SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: STYLVADYIE VISKHNDDIQ HVWESKADGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKRYSE FINFPIHLWA SKEVETEVPV EEDESTEEET
301: ETPSTEEEKE EDAEDEDSEK KQKTKKVKET VYEWELLNDV KAIWLRSPKE VTEEEYTKFY HSLSKDFSEE KPMAWSHFNA EGDVEFKAVL YVPPKAPHDL
401: YESYYNSNKA NLKLYVRRVF ISDEFDELLP KYLSFLKGLV DSDTLPLNVS REMLQQHSSL KTIKKKLIRK ALDMIRKLAE EDPDEVHDDD KKDVEKSGEN
501: DEKKGQYSKF WNEFGKSIKL GIIEDASNRN RLAKLLRFET TKSDGKLTSL DQYIKRMKKG QKDVFYITGS SKEQLEKSPF LERLIKKGYE VIFFTDPVDE
601: YLMQYLMDYE DKKFQNVSKE GLKVGKDSKV KELKEAFKEL TKWWKESLAS ENVDDVKISN RLADTPCVVV ASKFGWSANM ERIMQSQTLS DANKQAYMRG
701: KRVLEINPRH PIIKELKERV ASDPEDESVK ETAQLMYQTA LIESGFVLND PKDFAGRIYN SVKSSLKISP DAVAEEEVEA EETETSEEAT EAKSDDLAGG
801: LNIEAEQVEE RRQPRMNCRF HLVMFFLIYV FLYSLVKSRI LVFFTIWFLM DYVKATQHVF WFEAFNILLK Q
Best Arabidopsis Sequence Match ( AT4G24190.1 )
(BLAST)
001: MRKRTLVSVL FLFSLLFLLP DQGRKLHANA EESSDDVTDP PKVEEKIGGH GGLSTDSDVV HRESESMSKK TLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDTAKLEIQ IKLDKAKKIL SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: SAYLVADYIE VISKHNDDSQ YVWESKANGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKELVK RYSEFINFPI SLWASKEVET EVPVEEDESA
301: DEETETTSTE EEKEEDAEEE DGEKKQKTKK VKETVYEWEL LNDVKAIWLR SPKEVTEEEY TKFYHSLSKD FTDEKPMAWS HFNAEGDVEF KAVLYVPPKA
401: PHDLYESYYN SNKANLKLYV RRVFISDEFD ELLPKYLSFL KGLVDSDTLP LNVSREMLQQ HSSLKTIKKK LIRKALDMIR KLAEEDPDEI HDDEKKDVEK
501: SGENDEKKGQ YTKFWNEFGK SVKLGIIEDA ANRNRLAKLL RFETTKSDGK LTSLDQYIKR MKKSQKDIFY ITGSSKEQLE KSPFLERLIK KGYEVIFFTD
601: PVDEYLMQYL MDYEDKKFQN VSKEGLKVGK DSKDKELKEA FKELTKWWKG NLASENVDDV KISNRLADTP CVVVTSKFGW SANMERIMQS QTLSDANKQA
701: YMRGKRVLEI NPRHPIIKEL KDRIASDPED ESVKETAQLM YQTALIESGF ILTDPKDFAA RIYNSVKSGL NISPDAVADE EIEAAEEPET SEATETKSDD
801: LAGGLNIEAE PVEQQEENTK DEL
Arabidopsis Description
HSP90-7Endoplasmin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9STX5]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.