CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66280	Canola	cytosol	27.91	86.1
CDY33122	Canola	plastid	89.1	78.29
CDY04167	Canola	plastid	86.63	78.01
CDX83528	Canola	plastid	87.35	76.76
Bra026525.1-P	Field mustard	cytosol	61.05	76.64
CDY48069	Canola	plastid	87.65	76.62
AT2G04030.1	Thale cress	plastid	86.34	76.15
CDY66279	Canola	mitochondrion	45.93	72.15
KRH71021	Soybean	nucleus	77.91	67.51
VIT_01s0010g00680.t01	Wine grape	plastid	77.33	67.17
KRH75182	Soybean	plastid	76.89	66.71
PGSC0003DMT400050556	Potato	cytosol, plastid	76.31	65.87
Solyc05g010670.2.1	Tomato	plastid	75.0	65.57
GSMUA_Achr3P28100_001	Banana	plastid	75.73	65.29
GSMUA_Achr9P22700_001	Banana	plastid	74.85	64.7
HORVU5Hr1G070720.1	Barley	plastid	72.24	63.8
TraesCS5B01G249000.2	Wheat	plastid	72.24	63.64
TraesCS5A01G251000.1	Wheat	plastid	72.24	63.64
Zm00001d020827_P001	Maize	mitochondrion	73.4	63.36
EES14330	Sorghum	plastid	72.38	63.2
Zm00001d052809_P002	Maize	plastid	72.67	63.05
Os09t0474300-01	Rice	plastid	55.52	58.41
CDY35962	Canola	mitochondrion	60.47	51.81
CDY22132	Canola	mitochondrion	59.45	50.87
CDY28017	Canola	mitochondrion	57.27	50.06
CDY50297	Canola	plastid	35.47	38.36
CDY27839	Canola	cytosol	37.79	36.88
CDY11967	Canola	cytosol	29.8	35.59
CDY11961	Canola	cytosol	18.75	35.44
CDY22598	Canola	cytosol	24.42	35.37
CDY06551	Canola	cytosol	28.05	33.68
CDY11921	Canola	cytosol	26.16	33.52
CDY64982	Canola	cytosol	26.74	33.52
CDY08910	Canola	endoplasmic reticulum	38.08	33.46
CDY20742	Canola	cytosol	26.74	33.39
CDY36807	Canola	cytosol	27.91	33.39
CDY03477	Canola	endoplasmic reticulum	39.39	32.97
CDY34264	Canola	endoplasmic reticulum	39.39	32.97
CDY24830	Canola	endoplasmic reticulum	38.81	32.6
CDX92620	Canola	endoplasmic reticulum	37.21	32.32
CDY36776	Canola	cytosol	16.72	31.68
CDY36772	Canola	cytosol	16.72	31.68
CDY10992	Canola	endoplasmic reticulum	38.81	30.65
CDY11962	Canola	cytosol	6.25	29.66
CDY36775	Canola	cytosol	6.25	29.25
CDY36771	Canola	cytosol	6.1	28.57
CDY06545	Canola	cytosol	2.47	27.87
CDY06544	Canola	cytosol	4.22	25.22
CDY50296	Canola	cytosol	1.6	17.74
CDY06546	Canola	cytosol	1.74	16.22

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.40.50.11260	GO:A0A078EK95
EnsemblPlants:CDX99788	ProteinID:CDX99788	ProteinID:CDX99788.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00108461001	InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Hsp90_fam
InterPro:IPR036890	InterPro:IPR037196	PFAM:PF00183	PFAM:PF13589	PIRSF:PIRSF002583	PANTHER:PTHR11528
PANTHER:PTHR11528:SF41	InterPro:Ribosomal_S5_D2-typ_fold	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI0004EE64EC
SEG:seg	:	:	:	:	:

Description

BnaC02g35320D

Coordinates

chrLK031913:-:1215946..1220612

Molecular Weight (calculated)

78393.7 Da

IEP (calculated)

5.460

GRAVY (calculated)

-0.575

Length

688 amino acids

Sequence
(BLAST)

001: MAPALSRSSL YTTLPLTPRT QSHLTTAFLP RCGGGGGLRT GKETAEEGSG EKSEYQAEVS RLLDLIVHSL CSHKPDPDNG TITITDTGIG MTKEELIDCY
101: GTIAQSGTSK FLKALKENKD LGADNGLIGQ FGVGFYSAFL VAEKVVVSTK SPKSDKQYVW ESVADSSSYV IREETDPENF LTPWNSNNSE DDKYEFAEST
201: TIKNLVKNYS QFVGFPIYTW QEKSRTIERK NHLRKEKKRK RVSPKKTKKT TKTEKYWDWE LANETKPLWM RNSKEVSKEE YNEFYKKAFS EFLDPLAHTH
301: FTTEGEVEFR SILYIPGMGP LNNEDVTNPK TKNIRLHVKR VFISDDFDGE LFPRYLSFVK GIVDSNDLPL NVSPEILQES RIVRIMRKRL HSLLHFYVKT
401: KRFDYKKFWE NFGRFIKLGC IEDTVNHKRI TPLLRFYSSK NEELTSLDEY IENMGENQKA IYYLATDSLK SAKSAPFLEK LIQKDIEVLY LVEPIDEVAI
501: QNLQTNKEKK FVDISKEDWN LVSIVIAILE REAKQEFNIL CDWMKQQLGD KVAKVQVSNR LSSSPCVLVS GKFGWSANME RRILEINPDH PIIKDLNAAC
601: KNAPESSEAT RVVDLLYDTA IIPSGFTPDN PAELGDKIYE MMAMAVGGRW GRVEEEESSS VGEGDEKDGE AEVVEPSEVR AESDPWQD

Best Arabidopsis Sequence Match ( AT2G04030.1 )
(BLAST)

001: MAPALSRSLY TSPLTSVPIT PVSSRLSHLR SSFLPHGGAL RTGVSCSWNL EKRCNRFAVK CDAAVAEKET TEEGSGEKFE YQAEVSRLLD LIVHSLYSHK
101: EVFLRELVSN ASDALDKLRF LSVTEPSLLG DGGDLEIRIK PDPDNGTITI TDTGIGMTKE ELIDCLGTIA QSGTSKFLKA LKENKDLGAD NGLIGQFGVG
201: FYSAFLVAEK VVVSTKSPKS DKQYVWESVA DSSSYLIREE TDPDNILRRG TQITLYLRED DKYEFAESTR IKNLVKNYSQ FVGFPIYTWQ EKSRTIEVEE
301: DEPVKEGEEG EPKKKKTTKT EKYWDWELAN ETKPLWMRNS KEVEKGEYNE FYKKAFNEFL DPLAHTHFTT EGEVEFRSIL YIPGMGPLNN EDVTNPKTKN
401: IRLYVKRVFI SDDFDGELFP RYLSFVKGVV DSDDLPLNVS REILQESRIV RIMRKRLIRK TFDMIQEISE SENKEDYKKF WENFGRFLKL GCIEDTGNHK
501: RITPLLRFFS SKNEEELTSL DDYIENMGEN QKAIYYLATD SLKSAKSAPF LEKLIQKDIE VLYLVEPIDE VAIQNLQTYK EKKFVDISKE DLELGDEDEV
601: KDREAKQEFN LLCDWIKQQL GDKVAKVQVS NRLSSSPCVL VSGKFGWSAN MERLMKAQAL GDTSSLEFMR GRRILEINPD HPIIKDLNAA CKNAPESTEA
701: TRVVDLLYDT AIISSGFTPD SPAELGNKIY EMMAMAVGGR WGRVEEEEES STVNEGDDKS GETEVVEPSE VRAESDPWQD

Arabidopsis Description

HSP90-5HSP90.5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPV7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.