Factsheet for VIT_01s0010g00680.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71021	Soybean	nucleus	85.61	85.39
AT2G04030.1	Thale cress	plastid	83.59	84.87
CDY66280	Canola	cytosol	23.86	84.75
KRH75182	Soybean	plastid	84.6	84.49
Bra026525.1-P	Field mustard	cytosol	58.33	84.31
CDY33122	Canola	plastid	83.33	84.29
CDX83528	Canola	plastid	83.21	84.16
PGSC0003DMT400050556	Potato	cytosol, plastid	84.22	83.69
Bra025142.1-P	Field mustard	plastid	82.83	83.35
CDY48069	Canola	plastid	82.83	83.35
CDY04167	Canola	plastid	80.3	83.25
Solyc05g010670.2.1	Tomato	plastid	82.58	83.1
Bra017360.1-P	Field mustard	plastid	80.93	83.03
CDY66279	Canola	mitochondrion	45.71	82.65
GSMUA_Achr3P28100_001	Banana	plastid	82.45	81.83
GSMUA_Achr9P22700_001	Banana	plastid	81.57	81.16
EES14330	Sorghum	plastid	77.9	78.3
Zm00001d052809_P002	Maize	plastid	78.03	77.93
Zm00001d020827_P001	Maize	mitochondrion	78.28	77.79
TraesCS5B01G249000.2	Wheat	plastid	76.64	77.72
HORVU5Hr1G070720.1	Barley	plastid	76.39	77.66
TraesCS5A01G251000.1	Wheat	plastid	76.52	77.59
CDX99788	Canola	plastid	67.17	77.33
Os09t0474300-01	Rice	plastid	59.72	72.32
VIT_12s0057g00670.t01	Wine grape	cytosol	65.4	61.16
VIT_00s2341g00010.t01	Wine grape	cytosol	2.9	46.94
VIT_02s0025g00280.t01	Wine grape	cytosol	41.41	46.66
VIT_16s0050g01150.t01	Wine grape	cytosol	41.16	46.31
VIT_00s0194g00030.t01	Wine grape	cytosol	40.78	46.21
VIT_19s0015g01090.t01	Wine grape	cytosol	40.15	45.17
VIT_14s0083g01230.t01	Wine grape	cytosol	3.03	44.44
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	41.54	40.22
VIT_13s0106g00410.t01	Wine grape	cytosol	6.19	40.16
VIT_08s0007g05760.t01	Wine grape	cytosol	2.9	32.86
VIT_05s0062g00690.t01	Wine grape	cytosol	9.22	30.17
VIT_00s1569g00010.t01	Wine grape	cytosol	3.91	29.52
VIT_05s0094g00110.t01	Wine grape	nucleus, peroxisome, plastid	8.71	25.75
VIT_00s0131g00250.t01	Wine grape	cytosol	5.93	22.38

Protein Annotations

Gene3D:1.20.120.790	EntrezGene:100264968	wikigene:100264968	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10
Gene3D:3.30.70.2140	Gene3D:3.40.50.11260	ProteinID:CCB51152	ProteinID:CCB51152.1	ncoils:Coil	UniProt:F6HGF1
EMBL:FN595754	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773
GO:GO:0005774	GO:GO:0006457	GO:GO:0006810	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0009408	GO:GO:0009414	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628
GO:GO:0009651	GO:GO:0009704	GO:GO:0009791	GO:GO:0009941	GO:GO:0009987	GO:GO:0010157
GO:GO:0016020	GO:GO:0042803	GO:GO:0045037	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
EntrezGene:LOC100264968	wikigene:LOC100264968	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583
PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF41	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387
SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	TIGR:TC57428	TIGR:TC61739	TIGR:TC67613
UniParc:UPI00015C97C6	ArrayExpress:VIT_01s0010g00680	EnsemblPlantsGene:VIT_01s0010g00680	EnsemblPlants:VIT_01s0010g00680.t01	unigene:Vvi.7350	RefSeq:XP_002267463
RefSeq:XP_002267463.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:+:15794446..15805337

Molecular Weight (calculated)

90469.8 Da

IEP (calculated)

4.636

GRAVY (calculated)

-0.614

Length

792 amino acids

Sequence
(BLAST)

001: MAPVLSRSLA TAPLTSFPLN NINNNRRVLN LRNTFVPLNG LRKGFSCSGL KWKLEKRGSR VGVRCEAGVA EKEAPDTPGE KFEYQAEVSR LLDLIVHSLY
101: SHKEVFLREL VSNASDALDK LRFLSVTEPS LLGDAGELEI RIKPDPDNGT ITITDTGIGM TKEELIDCLG TIAQSGTSKF LKALKENQDL GADNGLIGQF
201: GVGFYSAFLV AEKVTVSTKS PRSEKQYVWE AVADSSSYVI REETDPEKSL PRGTQITLYL RPDDKYEFSE PSKIQSLVKN YSQFVSFPIY TWQEKSRTVE
301: VEEEEEPKEG EEAKPEDQKK KKKTITEKYW DWELANETKP IWMRNPREVE KDEYNDFYKK TFNEFLDPLS HIHFTTEGEV EFRSILYIPG MGPLNNEDVM
401: NPKTKNIRLY VKRVFISDDF DGELFPRYLS FVKGVVDSDD LPLNVSREIL QESRIVRIMR KRLVRKTFDM IQEVSESENK EDYKKFWENF GRFLKLGCIE
501: DTGNHKRITP LLRFHTSKSE EELTSLDDYV ENMGENQKAI YYLATDSLKS AKTAPFLEKL VQKDIEVLYL IEPIDEVAIQ NLQTYKEKKF VDISKEDLEL
601: GDDDEVKERE TKQEYNLLCD WIKQQLGDKV AKVQVSKRLS SSPCVLVSGK FGWSANMERL MKAQALGDTS SLEFMRGRRI LEINPDHPII KDLNAACKLE
701: PDSSEARRAV DLLYDTALIS SGFSPDSPAE LGNKIYEMMS MALGGRWGRA EGEGEEEEEE KEAEVVQEDA TESETQVIEP SEVRAESDPW ND

Best Arabidopsis Sequence Match ( AT2G04030.1 )
(BLAST)

001: MAPALSRSLY TSPLTSVPIT PVSSRLSHLR SSFLPHGGAL RTGVSCSWNL EKRCNRFAVK CDAAVAEKET TEEGSGEKFE YQAEVSRLLD LIVHSLYSHK
101: EVFLRELVSN ASDALDKLRF LSVTEPSLLG DGGDLEIRIK PDPDNGTITI TDTGIGMTKE ELIDCLGTIA QSGTSKFLKA LKENKDLGAD NGLIGQFGVG
201: FYSAFLVAEK VVVSTKSPKS DKQYVWESVA DSSSYLIREE TDPDNILRRG TQITLYLRED DKYEFAESTR IKNLVKNYSQ FVGFPIYTWQ EKSRTIEVEE
301: DEPVKEGEEG EPKKKKTTKT EKYWDWELAN ETKPLWMRNS KEVEKGEYNE FYKKAFNEFL DPLAHTHFTT EGEVEFRSIL YIPGMGPLNN EDVTNPKTKN
401: IRLYVKRVFI SDDFDGELFP RYLSFVKGVV DSDDLPLNVS REILQESRIV RIMRKRLIRK TFDMIQEISE SENKEDYKKF WENFGRFLKL GCIEDTGNHK
501: RITPLLRFFS SKNEEELTSL DDYIENMGEN QKAIYYLATD SLKSAKSAPF LEKLIQKDIE VLYLVEPIDE VAIQNLQTYK EKKFVDISKE DLELGDEDEV
601: KDREAKQEFN LLCDWIKQQL GDKVAKVQVS NRLSSSPCVL VSGKFGWSAN MERLMKAQAL GDTSSLEFMR GRRILEINPD HPIIKDLNAA CKNAPESTEA
701: TRVVDLLYDT AIISSGFTPD SPAELGNKIY EMMAMAVGGR WGRVEEEEES STVNEGDDKS GETEVVEPSE VRAESDPWQD

Arabidopsis Description

HSP90-5HSP90.5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPV7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.