Factsheet for VIT_19s0015g01090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0207g00210.t01
VIT_18s0001g11710.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56010.1	VIT_00s0207g00210.t01	AT5G66570.1	16619024
AT5G56010.1	VIT_18s0001g11710.t01	AT5G66570.1	16619024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0194g00030.t01	Wine grape	cytosol	95.03	95.71
KRH46427	Soybean	nucleus	93.89	94.56
KRG98439	Soybean	nucleus	93.89	94.16
CDY11961	Canola	cytosol	48.15	93.13
Solyc12g015880.1.1	Tomato	nucleus	91.76	92.42
Solyc07g065840.2.1	Tomato	nucleus, plastid	91.76	92.42
PGSC0003DMT400057003	Potato	cytosol	91.34	91.99
PGSC0003DMT400076601	Potato	cytosol	91.19	91.85
Bra035599.1-P	Field mustard	cytosol	73.44	91.83
Bra035593.1-P	Field mustard	cytosol	87.64	91.82
Bra028952.1-P	Field mustard	cytosol	91.05	91.7
PGSC0003DMT400037336	Potato	cytosol	91.05	91.7
Bra028924.1-P	Field mustard	cytosol	90.91	91.56
AT5G56010.1	Thale cress	cytosol	90.77	91.42
CDY11967	Canola	cytosol	74.72	91.32
Bra028948.1-P	Field mustard	cytosol	90.34	91.12
AT5G56000.1	Thale cress	cytosol	89.35	89.99
CDY22598	Canola	cytosol	60.09	89.05
AT5G56030.2	Thale cress	cytosol	91.05	88.05
VIT_00s2341g00010.t01	Wine grape	cytosol	6.11	87.76
VIT_00s1569g00010.t01	Wine grape	cytosol	13.07	87.62
CDY36807	Canola	cytosol	71.16	87.13
CDY06551	Canola	cytosol	70.74	86.91
CDY11921	Canola	cytosol	66.19	86.78
VIT_02s0025g00280.t01	Wine grape	cytosol	86.65	86.77
CDY64982	Canola	cytosol	67.61	86.7
CDY20742	Canola	cytosol	67.76	86.57
VIT_16s0050g01150.t01	Wine grape	cytosol	86.22	86.22
CDY36776	Canola	cytosol	44.32	85.95
CDY36772	Canola	cytosol	44.32	85.95
CDY36775	Canola	cytosol	17.47	83.67
CDY36771	Canola	cytosol	17.33	82.99
CDY11962	Canola	cytosol	16.9	82.07
VIT_14s0083g01230.t01	Wine grape	cytosol	4.97	64.81
VIT_13s0106g00410.t01	Wine grape	cytosol	10.51	60.66
VIT_08s0007g05760.t01	Wine grape	cytosol	4.97	50.0
VIT_00s0131g00250.t01	Wine grape	cytosol	14.63	49.05
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	50.14	43.15
VIT_05s0062g00690.t01	Wine grape	cytosol	14.77	42.98
VIT_01s0010g00680.t01	Wine grape	plastid	45.17	40.15
VIT_12s0057g00670.t01	Wine grape	cytosol	43.18	35.89
VIT_05s0094g00110.t01	Wine grape	nucleus, peroxisome, plastid	11.79	30.97

Protein Annotations

Gene3D:1.20.120.790	EntrezGene:100261759	wikigene:100261759	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10
Gene3D:3.30.70.2140	Gene3D:3.40.50.11260	ProteinID:CCB62036	ProteinID:CCB62036.1	ncoils:Coil	UniProt:F6I581
EMBL:FN596747	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C
InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890
InterPro:IPR037196	EntrezGene:LOC100261759	wikigene:LOC100261759	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518
PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74	InterPro:Ribosomal_S5_D2-typ_fold
SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	TIGR:TC51985	TIGR:TC52602
TIGR:TC53932	TIGR:TC61689	UniParc:UPI000198582F	ArrayExpress:VIT_19s0015g01090	EnsemblPlantsGene:VIT_19s0015g01090	EnsemblPlants:VIT_19s0015g01090.t01
unigene:Vvi.23190	unigene:Vvi.26365	unigene:Vvi.9085	RefSeq:XP_002273244	RefSeq:XP_002273244.1	SEG:seg

Description

No Description!

Coordinates

chr19:-:9159231..9162747

Molecular Weight (calculated)

80853.2 Da

IEP (calculated)

4.718

GRAVY (calculated)

-0.614

Length

704 amino acids

Sequence
(BLAST)

001: MAEVETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PDLFIHIVPD KTNNTLSIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VAEKVIVTTK HNDDEQYVWE SQAGGSFTVT RDTSGERLGR GTKITLHLKE DQLEYLEERR VKDLIKKHSE
201: FISYPISLWI EKTTEKEISD DEDEEDKKDE DKKDEEGKVE EVDEEKEKEE KKKKKIKEVS HEWSLVNKQK PIWMRKPEEI TKEEYSAFYK SLTNDWEEHL
301: AVKHFSVEGQ LEFKAILFVP KRAPFDLFDT RKKPNNIKLY VRRVFIMDNC EELIPEYLGF VKGIVDSEDL PLNISREMLQ QNKILKVIRK NLVKKCIELF
401: FEIAENKDDY NKFYEAFSKN LKLGIHEDSQ NKTKLAELLR YHSTKSGDEL TSLKDYVTRM KEGQSDIYYI TGESKKAVEN SPFLEKLKKK GYEVLYMVDA
501: IDEYAVGQLK EFEGKKLVSA TKEGLKLDES EDEKKQQEAL KEKFEGLCKV MKDVLGERVE KVVVSDRVVD SPCCLVTGEY GWTANMERIM KAQALRDSSM
601: AGYMSSKKTM EINPENPIME ELRKRTDVDK NDKSVKDLVL LLFETSLLTS GFSLDEPNTF GNRIHRMLKL GLNIDEEAGD VDVDMPPLEE ADAEAEGSKM
701: EEVD

Best Arabidopsis Sequence Match ( AT5G56030.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGETLGR GTKMVLYLKE DQLEYLEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP EYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIFYITGESK KAVENSPFLE KLKKKGIEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLDETEDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSID DDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.