Factsheet for VIT_00s0194g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_00s0207g00210.t01
VIT_18s0001g11710.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56010.1	VIT_00s0207g00210.t01	AT5G66570.1	16619024
AT5G56010.1	VIT_18s0001g11710.t01	AT5G66570.1	16619024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1569g00010.t01	Wine grape	cytosol	14.74	98.1
KRG98439	Soybean	nucleus	96.28	95.87
KRH46427	Soybean	nucleus	95.85	95.85
VIT_19s0015g01090.t01	Wine grape	cytosol	95.71	95.03
Solyc12g015880.1.1	Tomato	nucleus	93.71	93.71
AT5G56010.1	Thale cress	cytosol	93.28	93.28
CDY11961	Canola	cytosol	48.5	93.13
Bra035593.1-P	Field mustard	cytosol	89.41	93.01
PGSC0003DMT400076601	Potato	cytosol	92.99	92.99
Bra028924.1-P	Field mustard	cytosol	92.99	92.99
Bra028952.1-P	Field mustard	cytosol	92.85	92.85
Solyc07g065840.2.1	Tomato	nucleus, plastid	92.85	92.85
PGSC0003DMT400057003	Potato	cytosol	92.85	92.85
Bra035599.1-P	Field mustard	cytosol	74.68	92.72
PGSC0003DMT400037336	Potato	cytosol	92.7	92.7
Bra028948.1-P	Field mustard	cytosol	92.13	92.26
CDY11967	Canola	cytosol	75.97	92.19
VIT_00s2341g00010.t01	Wine grape	cytosol	6.44	91.84
AT5G56000.1	Thale cress	cytosol	91.56	91.56
CDY22598	Canola	cytosol	61.37	90.32
AT5G56030.2	Thale cress	cytosol	93.56	89.84
CDY36775	Canola	cytosol	18.6	88.44
CDY36807	Canola	cytosol	72.53	88.17
CDY06551	Canola	cytosol	71.96	87.78
CDY36771	Canola	cytosol	18.45	87.76
CDY11921	Canola	cytosol	67.38	87.71
CDY20742	Canola	cytosol	69.1	87.66
VIT_02s0025g00280.t01	Wine grape	cytosol	88.13	87.62
CDY64982	Canola	cytosol	68.81	87.61
CDY11962	Canola	cytosol	18.03	86.9
VIT_16s0050g01150.t01	Wine grape	cytosol	87.27	86.65
CDY36772	Canola	cytosol	44.49	85.67
CDY36776	Canola	cytosol	44.49	85.67
VIT_14s0083g01230.t01	Wine grape	cytosol	5.01	64.81
VIT_13s0106g00410.t01	Wine grape	cytosol	10.59	60.66
VIT_08s0007g05760.t01	Wine grape	cytosol	5.01	50.0
VIT_00s0131g00250.t01	Wine grape	cytosol	13.88	46.19
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	50.5	43.15
VIT_05s0062g00690.t01	Wine grape	cytosol	14.88	42.98
VIT_01s0010g00680.t01	Wine grape	plastid	46.21	40.78
VIT_12s0057g00670.t01	Wine grape	cytosol	44.06	36.36
VIT_05s0094g00110.t01	Wine grape	nucleus, peroxisome, plastid	12.02	31.34

Protein Annotations

Gene3D:1.20.120.790	EntrezGene:100246843	wikigene:100246843	EntrezGene:100255299	wikigene:100255299	MapMan:19.1.6.1
Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260	EMBL:AM426751	ProteinID:CAN62488
ProteinID:CAN62488.1	ProteinID:CCB50044	ProteinID:CCB50044.1	ncoils:Coil	UniProt:F6HCU9	EMBL:FN595527
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HATPase_C	InterPro:HATPase_C_sf
InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam	InterPro:IPR036890	InterPro:IPR037196
EntrezGene:LOC100246843	wikigene:LOC100246843	EntrezGene:LOC100255299	wikigene:LOC100255299	HAMAP:MF_00505	PFAM:PF00183
PFAM:PF02518	PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF74
InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	TIGR:TC61961
TIGR:TC69193	UniParc:UPI0002109B01	ArrayExpress:VIT_00s0194g00030	EnsemblPlantsGene:VIT_00s0194g00030	EnsemblPlants:VIT_00s0194g00030.t01	RefSeq:XP_003635036
RefSeq:XP_003635036.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:10549350..10552957

Molecular Weight (calculated)

80010.3 Da

IEP (calculated)

4.707

GRAVY (calculated)

-0.581

Length

699 amino acids

Sequence
(BLAST)

001: MAETETFAFQ AEINQLLSLI INTFYSNKEI FLREIISNSS DALDKIRFES LTDKSKLDAQ PELFIHIVPD KTNNSLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VAEKVIVTTK HNDDEQYVWE SQAGGSFTVT RDTSGESLGR GTKITLYLKE DQLEYLEERR LKDLIKKHSE
201: FISYPISLWI EKTTEKEISD DEDEEDKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWSL VNKQKPIWMR KPEEITKEEY AAFYKSLTND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTRKKPN NIKLYVRRVF IMDNCEELIP EYLGFVKGIV DSEDLPLNIS REMLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKDDYNKFYE AFSKNLKLGI HEDSQNKGKL AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIYYITGESK KAVENSPFLE KLKKKGIEVL FMVDAIDEYA
501: VGQLKEFEGK KLVSATKEGL KLDESEDEKK KQEALKEKFE GLCKVIKDVL GDRVEKVVVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NPIMEELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGNRIH RMMKLGLSID EDGPEADTDM PPLEEADADA EGSKMEEVD

Best Arabidopsis Sequence Match ( AT5G56030.1 )
(BLAST)

001: MADAETFAFQ AEINQLLSLI INTFYSNKEI FLRELISNSS DALDKIRFES LTDKSKLDGQ PELFIHIIPD KTNNTLTIID SGIGMTKADL VNNLGTIARS
101: GTKEFMEALA AGADVSMIGQ FGVGFYSAYL VADKVVVTTK HNDDEQYVWE SQAGGSFTVT RDTSGETLGR GTKMVLYLKE DQLEYLEERR LKDLVKKHSE
201: FISYPISLWI EKTIEKEISD DEEEEEKKDE EGKVEEVDEE KEKEEKKKKK IKEVSHEWDL VNKQKPIWMR KPEEINKEEY AAFYKSLSND WEEHLAVKHF
301: SVEGQLEFKA ILFVPKRAPF DLFDTKKKPN NIKLYVRRVF IMDNCEDIIP EYLGFVKGIV DSEDLPLNIS RETLQQNKIL KVIRKNLVKK CLELFFEIAE
401: NKEDYNKFYE AFSKNLKLGI HEDSQNRTKI AELLRYHSTK SGDELTSLKD YVTRMKEGQN DIFYITGESK KAVENSPFLE KLKKKGIEVL YMVDAIDEYA
501: IGQLKEFEGK KLVSATKEGL KLDETEDEKK KKEELKEKFE GLCKVIKDVL GDKVEKVIVS DRVVDSPCCL VTGEYGWTAN MERIMKAQAL RDSSMAGYMS
601: SKKTMEINPE NSIMDELRKR ADADKNDKSV KDLVLLLFET ALLTSGFSLD EPNTFGSRIH RMLKLGLSID DDDAVEADAE MPPLEDDADA EGSKMEEVD

Arabidopsis Description

HSP81-2Heat shock protein 81-2 [Source:UniProtKB/TrEMBL;Acc:F4K6B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.