Factsheet for Zm00001d020827_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G070720.1	Barley	plastid	87.58	89.6
TraesCS5B01G249000.2	Wheat	plastid	87.58	89.37
TraesCS5A01G251000.1	Wheat	plastid	87.33	89.12
Zm00001d052809_P002	Maize	plastid	86.45	86.89
Os09t0474300-01	Rice	plastid	66.88	81.5
Bra026525.1-P	Field mustard	cytosol	55.33	80.47
GSMUA_Achr3P28100_001	Banana	plastid	80.3	80.2
GSMUA_Achr9P22700_001	Banana	plastid	80.05	80.15
KRH71021	Soybean	nucleus	79.67	79.97
CDY66280	Canola	cytosol	22.33	79.82
KRH75182	Soybean	plastid	78.92	79.32
AT2G04030.1	Thale cress	plastid	76.66	78.33
VIT_01s0010g00680.t01	Wine grape	plastid	77.79	78.28
CDY66279	Canola	mitochondrion	42.91	78.08
CDY33122	Canola	plastid	76.41	77.78
Solyc05g010670.2.1	Tomato	plastid	76.79	77.76
PGSC0003DMT400050556	Potato	cytosol, plastid	77.67	77.67
CDY48069	Canola	plastid	76.66	77.64
Bra025142.1-P	Field mustard	plastid	76.66	77.64
CDX83528	Canola	plastid	76.16	77.52
Bra017360.1-P	Field mustard	plastid	74.53	76.94
CDY04167	Canola	plastid	73.53	76.7
CDX99788	Canola	plastid	63.36	73.4
Zm00001d031274_P001	Maize	cytosol	12.05	69.57
Zm00001d035285_P003	Maize	extracellular	60.85	60.32
Zm00001d041719_P001	Maize	mitochondrion	61.23	60.02
Zm00001d031332_P007	Maize	cytosol	38.52	45.48
Zm00001d006008_P001	Maize	plastid	39.52	45.13
Zm00001d052855_P001	Maize	plasma membrane	39.4	44.92
Zm00001d024903_P001	Maize	plasma membrane	39.65	44.26
Zm00001d036401_P001	Maize	plasma membrane	43.66	43.28
Zm00001d014792_P003	Maize	plasma membrane	42.91	42.33
Zm00001d020898_P002	Maize	cytosol	37.39	42.03
Zm00001d009931_P001	Maize	cytosol	8.66	38.33

Protein Annotations

Gene3D:1.20.120.790	EntrezGene:100279992	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140
Gene3D:3.40.50.11260	UniProt:A0A1D6I6H5	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam
InterPro:IPR036890	InterPro:IPR037196	HAMAP:MF_00505	ProteinID:ONM55676.1	PFAM:PF00183	PFAM:PF02518
PIRSF:PIRSF002583	PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF41	InterPro:Ribosomal_S5_D2-typ_fold
SMART:SM00387	SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	UniParc:UPI0004DE7D0D	EnsemblPlantsGene:Zm00001d020827
EnsemblPlants:Zm00001d020827_P001	EnsemblPlants:Zm00001d020827_T001	SEG:seg	:	:	:

Description

Heat shock protein 90-5 chloroplastic

Coordinates

chr7:-:134001581..134006410

Molecular Weight (calculated)

90206.6 Da

IEP (calculated)

4.634

GRAVY (calculated)

-0.560

Length

797 amino acids

Sequence
(BLAST)

001: MAPALSRTLG PSSVAALRPS PSCRGLLRAA LAPQGRGASA RCAVGVRWEA ARRRRMAGVR CDAAVAEKPA GEEETAGEKY EYQAEVTRLM DLIVHSLYSH
101: KEVFLRELVS NASDALDKLR FLSVTDPSVL ADGGELEIRI KPDLEAGTIT ITDTGIGMTK DELKDCLGTI AQSGTSKFLK ALKENKDLGA DNGLIGQFGV
201: GFYSAFLVAE RVVVSTKSPK ADKQYVWEAE ADSSSYVIKE ENDPEKMLSR GTEITLYLRD DDKYEFADPT RIQGLVKNYS QFVSFPIYTW QEKSRTVEVE
301: EEEESKGEEA TEESKSEEAT EGEKQKKKKT ITEKYWDWEL ANETKPIWMR NPKEVEKTEY NEFYKKTFNE FLDPLAYTHF TTEGEVEFRS VLYVPGMAPL
401: SNEEIMNPKT KNIRLYVKRV FISDDFDGEL FPRYLSFVKG VVDSNDLPLN VSREILQESR IVRIMRKRLV RKTFDMIQEI AEKDGKEDYN KFWESFGKFM
501: KLGCIEDTGN HKRLAPLLRF YSSKNETDLI SLDQYVENMP ENQKAIYYIA TDSLQSAKTA PFLEKLVQKD IEVLYLIEPI DEVAIQNLQT YKEKKFVDIS
601: KEDLELGDED EDKEKESKQE YTLLCDWIKQ QLGDKVAKVQ ISKRLSSSPC VLVSGKFGWS ANMERLMKAQ TLGDTSSLEF MRGRRIFEIN PDHPIIKDLN
701: AACKNEPEST EAKRAAELLY EAALISSGYT PDSPAELGGK IYEMMTMALG GRWGRLETEE AEVIASIDDA DSSEGATTTT EVVEPSEVRT ESDPWKD

Best Arabidopsis Sequence Match ( AT2G04030.1 )
(BLAST)

001: MAPALSRSLY TSPLTSVPIT PVSSRLSHLR SSFLPHGGAL RTGVSCSWNL EKRCNRFAVK CDAAVAEKET TEEGSGEKFE YQAEVSRLLD LIVHSLYSHK
101: EVFLRELVSN ASDALDKLRF LSVTEPSLLG DGGDLEIRIK PDPDNGTITI TDTGIGMTKE ELIDCLGTIA QSGTSKFLKA LKENKDLGAD NGLIGQFGVG
201: FYSAFLVAEK VVVSTKSPKS DKQYVWESVA DSSSYLIREE TDPDNILRRG TQITLYLRED DKYEFAESTR IKNLVKNYSQ FVGFPIYTWQ EKSRTIEVEE
301: DEPVKEGEEG EPKKKKTTKT EKYWDWELAN ETKPLWMRNS KEVEKGEYNE FYKKAFNEFL DPLAHTHFTT EGEVEFRSIL YIPGMGPLNN EDVTNPKTKN
401: IRLYVKRVFI SDDFDGELFP RYLSFVKGVV DSDDLPLNVS REILQESRIV RIMRKRLIRK TFDMIQEISE SENKEDYKKF WENFGRFLKL GCIEDTGNHK
501: RITPLLRFFS SKNEEELTSL DDYIENMGEN QKAIYYLATD SLKSAKSAPF LEKLIQKDIE VLYLVEPIDE VAIQNLQTYK EKKFVDISKE DLELGDEDEV
601: KDREAKQEFN LLCDWIKQQL GDKVAKVQVS NRLSSSPCVL VSGKFGWSAN MERLMKAQAL GDTSSLEFMR GRRILEINPD HPIIKDLNAA CKNAPESTEA
701: TRVVDLLYDT AIISSGFTPD SPAELGNKIY EMMAMAVGGR WGRVEEEEES STVNEGDDKS GETEVVEPSE VRAESDPWQD

Arabidopsis Description

HSP90-5HSP90.5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPV7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.