Factsheet for Zm00001d014792_P003

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036401_P001	Maize	plasma membrane	96.04	96.52
KXG20895	Sorghum	endoplasmic reticulum	96.16	96.28
Os06t0716700-02	Rice	plasma membrane	91.46	91.01
TraesCS7D01G517800.1	Wheat	golgi, plastid	89.98	86.96
Zm00001d009931_P001	Maize	cytosol	19.31	86.67
GSMUA_Achr7P17770_001	Banana	endoplasmic reticulum	86.14	85.5
GSMUA_Achr1P07620_001	Banana	endoplasmic reticulum	85.27	84.54
HORVU7Hr1G117000.1	Barley	plastid	90.1	81.25
VIT_18s0001g14500.t01	Wine grape	endoplasmic reticulum	81.19	80.2
PGSC0003DMT400025743	Potato	extracellular	79.83	80.02
Solyc04g081570.2.1	Tomato	plastid	80.2	79.8
KRH05964	Soybean	endoplasmic reticulum	78.84	78.26
CDY34264	Canola	endoplasmic reticulum	78.96	77.62
CDY03477	Canola	endoplasmic reticulum	78.96	77.62
Bra013774.1-P	Field mustard	endoplasmic reticulum	78.71	77.37
AT4G24190.1	Thale cress	endoplasmic reticulum	78.09	76.67
CDY24830	Canola	endoplasmic reticulum	77.6	76.56
CDY08910	Canola	endoplasmic reticulum	74.13	76.5
CDX92620	Canola	endoplasmic reticulum	74.63	76.14
KRH17444	Soybean	nucleus	79.33	75.68
Bra010500.1-P	Field mustard	endoplasmic reticulum	73.39	75.45
CDY10992	Canola	endoplasmic reticulum	77.97	72.33
Zm00001d006008_P001	Maize	plastid	44.06	51.0
Zm00001d052855_P001	Maize	plasma membrane	43.94	50.79
Zm00001d031332_P007	Maize	cytosol	42.2	50.52
Zm00001d024903_P001	Maize	plasma membrane	43.81	49.58
Zm00001d020898_P002	Maize	cytosol	40.97	46.69
Zm00001d020827_P001	Maize	mitochondrion	42.33	42.91
Zm00001d052809_P002	Maize	plastid	41.46	42.24
Zm00001d031274_P001	Maize	cytosol	7.18	42.03
Zm00001d041719_P001	Maize	mitochondrion	39.6	39.36
Zm00001d035285_P003	Maize	extracellular	38.74	38.93
Solyc04g081630.1.1	Tomato	cytosol	9.65	29.21

Protein Annotations

Gene3D:1.20.120.790	MapMan:19.1.6.1	Gene3D:3.30.230.80	Gene3D:3.30.565.10	Gene3D:3.30.70.2140	Gene3D:3.40.50.11260
UniProt:A0A1D6GWE1	ProteinID:AQK67196.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:HATPase_C	InterPro:HATPase_C_sf	InterPro:HSP90_C	InterPro:Heat_shock_protein_90_CS	InterPro:Hsp90_N	InterPro:Hsp90_fam
InterPro:IPR036890	InterPro:IPR037196	HAMAP:MF_00505	PFAM:PF00183	PFAM:PF02518	PIRSF:PIRSF002583
PRINTS:PR00775	ScanProsite:PS00298	PANTHER:PTHR11528	PANTHER:PTHR11528:SF73	InterPro:Ribosomal_S5_D2-typ_fold	SMART:SM00387
SUPFAM:SSF110942	SUPFAM:SSF54211	SUPFAM:SSF55874	SignalP:SignalP-noTM	UniParc:UPI000220F840	EnsemblPlantsGene:Zm00001d014792
EnsemblPlants:Zm00001d014792_P003	EnsemblPlants:Zm00001d014792_T003	SEG:seg	:	:	:

Description

shepherd-like1

Coordinates

chr5:-:63348326..63353480

Molecular Weight (calculated)

92879.2 Da

IEP (calculated)

4.624

GRAVY (calculated)

-0.745

Length

808 amino acids

Sequence
(BLAST)

001: MRKWALSSAL LLLFLLTTLP DPAKKLQVNA EESSDDLANP PKVEEKLGAV PHGLSTDSEV AQREAESISR KTLRSSAEKF EFQAEVSRLM DIIINSLYSN
101: KDIFLRELIS NASDALDKIR FLSLTDKEVL GEGDTAKLEI QIKLDKEKKI LSIRDRGIGM TKEDLINNLG TIAKSGTSAF VEKMQSGGDL NLIGQFGVGF
201: YSVYLVADYV EVVSKHNDDK QYVWESKADG SFAISEDTWN EPLGRGTEIR LHLRDEAKEY LEEDKLKDLV KKYSEFINFP IYLWSTKEVD VEVPADEDET
301: SEEEDSSPET TEEETEEDEE KEKKPKTKTI KETTSEWELL NDMKAVWLRS PKEVTDEEYS KFYHSLAKDF GDDKPMGWSH FTAEGDVEFK ALLFIPPKAP
401: HDLYESYYNS NKSNLKLYVR RVFISDEFDD LLPKYLSFLR GIVDSDTLPL NVSREMLQQH SSLKTIKKKL IRKALDMIRK LAEEDPDEYS NKDKTDEEKN
501: EMEEKKGQYA KFWNEFGKSI KLGIIEDATN RNRLAKLLRF ESTKSDGKLA SLDEYISRMK PGQKDIFYLT GSSKDQLEKS PFLERLTKKN YEVIFFTDPM
601: DEYLMQYLMD YEDRKFQNVS KEGLKLGKDS RLKDLKESFK ELTEWWKKAL ESESVDSVKV SSRLHDTPCV VVTSKYGWSA NMEKIMQAQT LSDSSKQAYM
701: RGKRVLEINP RHPIIKELRD KVAQDNESEE LKQTARLVYQ TALMESGFNL PDPKEFASSI YKSVHKSLDL SPDAAVEEED EAEEQPEVEE KEPAAKEGSE
801: PSFDKDEL

Best Arabidopsis Sequence Match ( AT4G24190.1 )
(BLAST)

001: MRKRTLVSVL FLFSLLFLLP DQGRKLHANA EESSDDVTDP PKVEEKIGGH GGLSTDSDVV HRESESMSKK TLRSNAEKFE FQAEVSRLMD IIINSLYSNK
101: DIFLRELISN ASDALDKIRF LALTDKDVLG EGDTAKLEIQ IKLDKAKKIL SIRDRGIGMT KEDLIKNLGT IAKSGTSAFV EKMQSSGDLN LIGQFGVGFY
201: SAYLVADYIE VISKHNDDSQ YVWESKANGK FAVSEDTWNE PLGRGTEIRL HLRDEAGEYL EESKLKELVK RYSEFINFPI SLWASKEVET EVPVEEDESA
301: DEETETTSTE EEKEEDAEEE DGEKKQKTKK VKETVYEWEL LNDVKAIWLR SPKEVTEEEY TKFYHSLSKD FTDEKPMAWS HFNAEGDVEF KAVLYVPPKA
401: PHDLYESYYN SNKANLKLYV RRVFISDEFD ELLPKYLSFL KGLVDSDTLP LNVSREMLQQ HSSLKTIKKK LIRKALDMIR KLAEEDPDEI HDDEKKDVEK
501: SGENDEKKGQ YTKFWNEFGK SVKLGIIEDA ANRNRLAKLL RFETTKSDGK LTSLDQYIKR MKKSQKDIFY ITGSSKEQLE KSPFLERLIK KGYEVIFFTD
601: PVDEYLMQYL MDYEDKKFQN VSKEGLKVGK DSKDKELKEA FKELTKWWKG NLASENVDDV KISNRLADTP CVVVTSKFGW SANMERIMQS QTLSDANKQA
701: YMRGKRVLEI NPRHPIIKEL KDRIASDPED ESVKETAQLM YQTALIESGF ILTDPKDFAA RIYNSVKSGL NISPDAVADE EIEAAEEPET SEATETKSDD
801: LAGGLNIEAE PVEQQEENTK DEL

Arabidopsis Description

HSP90-7Endoplasmin homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9STX5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.