Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG34983 | Sorghum | nucleus, plastid | 88.38 | 86.55 |
| TraesCS7A01G049300.1 | Wheat | nucleus, plastid | 72.89 | 71.13 |
| TraesCS7D01G044400.1 | Wheat | nucleus, plastid | 74.3 | 69.18 |
| TraesCS4A01G435200.1 | Wheat | cytosol, plastid | 73.94 | 67.09 |
| Os02t0437200-01 | Rice | plasma membrane | 34.51 | 65.77 |
| GSMUA_Achr4P23350_001 | Banana | nucleus | 55.28 | 63.31 |
| HORVU7Hr1G008760.1 | Barley | nucleus, plastid | 52.11 | 61.67 |
| GSMUA_Achr5P01680_001 | Banana | cytosol | 54.23 | 55.8 |
| Bra026875.1-P | Field mustard | cytosol | 31.69 | 54.88 |
| Zm00001d016686_P003 | Maize | nucleus | 50.35 | 54.58 |
| KRH56857 | Soybean | nucleus | 54.93 | 52.0 |
| KRH03094 | Soybean | cytosol | 54.58 | 51.67 |
| VIT_01s0011g00670.t01 | Wine grape | cytosol | 50.35 | 51.07 |
| CDY42860 | Canola | cytosol, plastid | 50.0 | 50.9 |
| VIT_17s0000g06860.t01 | Wine grape | nucleus | 54.23 | 50.49 |
| KRH54642 | Soybean | nucleus | 51.41 | 50.0 |
| KRH63266 | Soybean | nucleus | 51.06 | 49.83 |
| CDY47025 | Canola | nucleus, plastid | 48.59 | 49.64 |
| AT5G61210.1 | Thale cress | nucleus | 52.11 | 49.33 |
| AT1G13890.2 | Thale cress | nucleus | 45.42 | 49.05 |
| PGSC0003DMT400083166 | Potato | nucleus | 52.46 | 48.69 |
| PGSC0003DMT400063113 | Potato | mitochondrion, nucleus | 52.46 | 48.69 |
| Solyc06g069570.2.1 | Tomato | nucleus, plastid | 52.11 | 48.37 |
| Bra029328.1-P | Field mustard | nucleus, plastid | 50.0 | 48.3 |
| Solyc05g012520.2.1 | Tomato | nucleus | 41.9 | 47.98 |
| CDX73442 | Canola | nucleus | 34.86 | 47.83 |
| Bra012978.1-P | Field mustard | nucleus | 51.06 | 47.54 |
| CDY02165 | Canola | nucleus | 51.06 | 47.39 |
| CDY23079 | Canola | nucleus | 50.7 | 47.37 |
| Bra005958.1-P | Field mustard | cytosol | 48.59 | 47.26 |
| AT5G07880.1 | Thale cress | nucleus | 41.55 | 47.01 |
| CDX78314 | Canola | cytosol | 47.89 | 46.42 |
| KRH70869 | Soybean | cytosol | 45.42 | 46.07 |
| Zm00001d028197_P001 | Maize | plastid | 39.08 | 45.68 |
| CDY33792 | Canola | cytosol | 42.61 | 45.49 |
| CDY16118 | Canola | cytosol | 42.61 | 45.49 |
| KRH75005 | Soybean | cytosol | 44.72 | 45.36 |
| Solyc03g115470.2.1 | Tomato | nucleus | 54.23 | 44.9 |
| PGSC0003DMT400072798 | Potato | cytosol | 40.49 | 43.4 |
| CDX81075 | Canola | nucleus | 13.73 | 39.0 |
| CDX69988 | Canola | endoplasmic reticulum, extracellular | 46.48 | 38.6 |
| CDX99033 | Canola | endoplasmic reticulum, extracellular | 46.48 | 37.71 |
| Bra013246.1-P | Field mustard | cytosol | 36.97 | 34.54 |
| Bra032989.1-P | Field mustard | nucleus | 39.79 | 29.5 |
| Bra009311.1-P | Field mustard | plastid | 47.18 | 13.16 |
Protein Annotations
| EnsemblPlants:Zm00001d019505_P001 | EnsemblPlants:Zm00001d019505_T001 | EnsemblPlantsGene:Zm00001d019505 | EntrezGene:100217287 | Gene3D:1.20.5.110 | InterPro:IPR000727 |
| InterPro:T_SNARE_dom | ncoils:Coil | PANTHER:PTHR19305 | PANTHER:PTHR19305:SF7 | PFscan:PS50192 | ProteinID:ONM53060.1 |
| SMART:SM00397 | SUPFAM:SSF58038 | UniParc:UPI00004FBE9A | UniProt:A0A1D6HXY8 | MapMan:22.7.3.1 | : |
Description
SNAP25 homologous protein SNAP33
Coordinates
chr7:-:38142425..38145129
Molecular Weight (calculated)
31591.0 Da
IEP (calculated)
9.573
GRAVY (calculated)
-0.983
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGKRSFFA PKKKATNPFD SDSDDDKPQQ RPARASSVPP PDEQRGSSSL FGAGDRGGLF SSAANHHYRN DFRDAGGLEG QSVQELEGYA AYKAEETTRR
101: TRGCVRIAEE MRDTASKTLV TVHQQGQQIH RTHMMAVDID QDLSRSEKLL GDLGGLFSKK WKPKKNGAIR GPMLTRDDSF IRKGSHLEQR QKLGLADHPP
201: PSNARQFRSE PSSALEKVEI EKAKQDDDLS DLSNILTELK GMAVDMGSEI ERQTKAMGDA EKDYDELNFR VKGANTRARR LLGR
101: TRGCVRIAEE MRDTASKTLV TVHQQGQQIH RTHMMAVDID QDLSRSEKLL GDLGGLFSKK WKPKKNGAIR GPMLTRDDSF IRKGSHLEQR QKLGLADHPP
201: PSNARQFRSE PSSALEKVEI EKAKQDDDLS DLSNILTELK GMAVDMGSEI ERQTKAMGDA EKDYDELNFR VKGANTRARR LLGR
001: MFGLRKSPAN LPKHNSVDLK SSKPNPFDSD DESDNKHTLN PSKRTTSEPS LADMTNPFGG ERVQKGDSSS SKQSLFSNSK YQYKNNFRDS GGIENQSVQE
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
Arabidopsis Description
SNAP33SNP33 [Source:UniProtKB/TrEMBL;Acc:A0A178UGR9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.