Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P01680_001 | Banana | cytosol | 72.18 | 64.86 |
| GSMUA_Achr6P24620_001 | Banana | nucleus | 61.29 | 57.14 |
| Bra026875.1-P | Field mustard | cytosol | 37.1 | 56.1 |
| Zm00001d019505_P001 | Maize | nucleus | 63.31 | 55.28 |
| KXG34983 | Sorghum | nucleus, plastid | 64.11 | 54.83 |
| KRH56857 | Soybean | nucleus | 65.73 | 54.33 |
| CDY47025 | Canola | nucleus, plastid | 60.89 | 54.32 |
| KRH03094 | Soybean | cytosol | 64.92 | 53.67 |
| TraesCS7A01G049300.1 | Wheat | nucleus, plastid | 62.5 | 53.26 |
| PGSC0003DMT400063113 | Potato | mitochondrion, nucleus | 65.32 | 52.94 |
| KRH63266 | Soybean | nucleus | 62.1 | 52.92 |
| CDY42860 | Canola | cytosol, plastid | 58.87 | 52.33 |
| VIT_01s0011g00670.t01 | Wine grape | cytosol | 58.87 | 52.14 |
| KRH54642 | Soybean | nucleus | 61.29 | 52.05 |
| CDX73442 | Canola | nucleus | 43.15 | 51.69 |
| AT5G61210.1 | Thale cress | nucleus | 62.5 | 51.67 |
| TraesCS7D01G044400.1 | Wheat | nucleus, plastid | 63.31 | 51.48 |
| AT1G13890.2 | Thale cress | nucleus | 54.44 | 51.33 |
| Bra029328.1-P | Field mustard | nucleus, plastid | 60.48 | 51.02 |
| Solyc06g069570.2.1 | Tomato | nucleus, plastid | 62.5 | 50.65 |
| PGSC0003DMT400083166 | Potato | nucleus | 62.5 | 50.65 |
| TraesCS4A01G435200.1 | Wheat | cytosol, plastid | 62.9 | 49.84 |
| VIT_17s0000g06860.t01 | Wine grape | nucleus | 61.29 | 49.84 |
| CDY23079 | Canola | nucleus | 60.89 | 49.67 |
| KRH70869 | Soybean | cytosol | 55.24 | 48.93 |
| Bra012978.1-P | Field mustard | nucleus | 60.08 | 48.85 |
| CDY02165 | Canola | nucleus | 60.08 | 48.69 |
| KRH75005 | Soybean | cytosol | 54.44 | 48.21 |
| AT5G07880.1 | Thale cress | nucleus | 48.79 | 48.21 |
| Bra005958.1-P | Field mustard | cytosol | 56.45 | 47.95 |
| Solyc03g115470.2.1 | Tomato | nucleus | 66.13 | 47.81 |
| CDX78314 | Canola | cytosol | 56.45 | 47.78 |
| Solyc05g012520.2.1 | Tomato | nucleus | 46.77 | 46.77 |
| CDY33792 | Canola | cytosol | 50.0 | 46.62 |
| CDY16118 | Canola | cytosol | 50.0 | 46.62 |
| PGSC0003DMT400072798 | Potato | cytosol | 46.37 | 43.4 |
| HORVU7Hr1G008760.1 | Barley | nucleus, plastid | 41.94 | 43.33 |
| CDX81075 | Canola | nucleus | 16.94 | 42.0 |
| CDX69988 | Canola | endoplasmic reticulum, extracellular | 57.26 | 41.52 |
| CDX99033 | Canola | endoplasmic reticulum, extracellular | 57.66 | 40.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.53 | 39.42 |
| Os02t0437200-01 | Rice | plasma membrane | 23.39 | 38.93 |
| Bra013246.1-P | Field mustard | cytosol | 46.37 | 37.83 |
| Bra032989.1-P | Field mustard | nucleus | 47.18 | 30.55 |
| Bra009311.1-P | Field mustard | plastid | 57.26 | 13.95 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:22.7.3.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0061025 | EnsemblPlantsGene:GSMUA_Achr4G23350_001 |
| EnsemblPlants:GSMUA_Achr4P23350_001 | EnsemblPlants:GSMUA_Achr4T23350_001 | InterPro:IPR000727 | UniProt:M0SRE6 | ScanProsite:PS00914 | PFscan:PS50192 |
| PANTHER:PTHR19305 | PANTHER:PTHR19305:SF7 | SMART:SM00397 | SUPFAM:SSF58038 | InterPro:Syntaxin/epimorphin_CS | InterPro:T_SNARE_dom |
| UniParc:UPI000294B19F | SEG:seg | : | : | : | : |
Description
SNAP25 homologous protein SNAP33 [Source:GMGC_GENE;Acc:GSMUA_Achr4G23350_001]
Coordinates
chr4:-:23463606..23468841
Molecular Weight (calculated)
27966.7 Da
IEP (calculated)
6.274
GRAVY (calculated)
-0.937
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSNQFGENV NEEIGWESSA AWGYSAVKNS YKNDFRDSGG IENQSVQELE NYAVYKAEET TNELNGCLRI AEEIREGATK TLVTLHQQGE QITRTHQTAA
101: DIEHDLSRGE KLLGNLGGLF SKKWKPKKTR EIRGPLLTRD DSFIKRGSHL EQRQRLGLSA PRPRSEPRHS SSSEPTSALE KVETEKAKQD DALSDLSNLL
201: GELKNMAIDM GSEIERQTAA LDHMEDDVEE VNFRVKGANL RGRRLLRK
101: DIEHDLSRGE KLLGNLGGLF SKKWKPKKTR EIRGPLLTRD DSFIKRGSHL EQRQRLGLSA PRPRSEPRHS SSSEPTSALE KVETEKAKQD DALSDLSNLL
201: GELKNMAIDM GSEIERQTAA LDHMEDDVEE VNFRVKGANL RGRRLLRK
001: MFGLRKSPAN LPKHNSVDLK SSKPNPFDSD DESDNKHTLN PSKRTTSEPS LADMTNPFGG ERVQKGDSSS SKQSLFSNSK YQYKNNFRDS GGIENQSVQE
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
Arabidopsis Description
SNAP33SNP33 [Source:UniProtKB/TrEMBL;Acc:A0A178UGR9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.