Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- golgi 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23079 | Canola | nucleus | 90.33 | 89.14 |
| Bra029328.1-P | Field mustard | nucleus, plastid | 84.67 | 86.39 |
| CDY02165 | Canola | nucleus | 88.0 | 86.27 |
| Bra012978.1-P | Field mustard | nucleus | 87.67 | 86.23 |
| CDY47025 | Canola | nucleus, plastid | 78.33 | 84.53 |
| CDY42860 | Canola | cytosol, plastid | 78.33 | 84.23 |
| GSMUA_Achr4P23350_001 | Banana | nucleus | 51.67 | 62.5 |
| KRH56857 | Soybean | nucleus | 62.0 | 62.0 |
| KRH03094 | Soybean | cytosol | 61.67 | 61.67 |
| VIT_17s0000g06860.t01 | Wine grape | nucleus | 62.33 | 61.31 |
| PGSC0003DMT400063113 | Potato | mitochondrion, nucleus | 62.0 | 60.78 |
| KRH63266 | Soybean | nucleus | 58.67 | 60.48 |
| Solyc06g069570.2.1 | Tomato | nucleus, plastid | 61.67 | 60.46 |
| PGSC0003DMT400083166 | Potato | nucleus | 61.33 | 60.13 |
| KRH54642 | Soybean | nucleus | 58.33 | 59.93 |
| AT1G13890.2 | Thale cress | nucleus | 52.33 | 59.7 |
| AT5G07880.1 | Thale cress | nucleus | 49.67 | 59.36 |
| GSMUA_Achr5P01680_001 | Banana | cytosol | 52.33 | 56.88 |
| Solyc03g115470.2.1 | Tomato | nucleus | 63.0 | 55.1 |
| Zm00001d019505_P001 | Maize | nucleus | 49.33 | 52.11 |
| TraesCS7A01G049300.1 | Wheat | nucleus, plastid | 50.0 | 51.55 |
| KXG34983 | Sorghum | nucleus, plastid | 49.67 | 51.38 |
| TraesCS7D01G044400.1 | Wheat | nucleus, plastid | 50.67 | 49.84 |
| TraesCS4A01G435200.1 | Wheat | cytosol, plastid | 50.67 | 48.56 |
| HORVU7Hr1G008760.1 | Barley | nucleus, plastid | 35.0 | 43.75 |
| Os02t0437200-01 | Rice | plasma membrane | 21.33 | 42.95 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:22.7.3.1 | EntrezGene:836242 | UniProt:A0A178UGR9 | ProteinID:AED97436.1 | ProteinID:ANM70496.1 |
| ArrayExpress:AT5G61210 | EnsemblPlantsGene:AT5G61210 | RefSeq:AT5G61210 | TAIR:AT5G61210 | RefSeq:AT5G61210-TAIR-G | EnsemblPlants:AT5G61210.1 |
| TAIR:AT5G61210.1 | EMBL:AY057627 | EMBL:AY085322 | EMBL:AY141994 | Unigene:At.24457 | ProteinID:BAB10383.1 |
| ProteinID:CAC79615.1 | GO:GO:0000911 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009504 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009612 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0051301 |
| GO:GO:0051707 | GO:GO:0061025 | InterPro:IPR000727 | RefSeq:NP_001332102.1 | RefSeq:NP_200929.1 | ProteinID:OAO92849.1 |
| PO:PO:0000003 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50192 | PANTHER:PTHR19305 | PANTHER:PTHR19305:SF7 |
| UniProt:Q9S7P9 | SMART:SM00397 | Symbol:SNAP33 | SUPFAM:SSF58038 | InterPro:T_SNARE_dom | UniParc:UPI0000135B06 |
| EMBL:X92419 | EMBL:X92420 | SEG:seg | : | : | : |
Description
SNAP33SNP33 [Source:UniProtKB/TrEMBL;Acc:A0A178UGR9]
Coordinates
chr5:+:24623248..24625631
Molecular Weight (calculated)
33646.2 Da
IEP (calculated)
8.442
GRAVY (calculated)
-1.083
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MFGLRKSPAN LPKHNSVDLK SSKPNPFDSD DESDNKHTLN PSKRTTSEPS LADMTNPFGG ERVQKGDSSS SKQSLFSNSK YQYKNNFRDS GGIENQSVQE
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.