Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0529500-01 | Rice | plasma membrane | 64.66 | 66.41 |
| EES05172 | Sorghum | cytosol | 63.53 | 64.75 |
| TraesCS2B01G208000.2 | Wheat | plastid | 63.53 | 64.26 |
| Zm00001d016686_P003 | Maize | nucleus | 62.41 | 63.36 |
| TraesCS2A01G181400.1 | Wheat | plastid | 62.03 | 62.74 |
| TraesCS3B01G423500.1 | Wheat | cytosol | 59.4 | 61.72 |
| TraesCS3D01G384300.1 | Wheat | cytosol | 59.4 | 61.72 |
| GSMUA_Achr4P23350_001 | Banana | nucleus | 57.14 | 61.29 |
| TraesCS3A01G391300.1 | Wheat | cytosol | 58.65 | 60.94 |
| HORVU3Hr1G088590.6 | Barley | cytosol | 59.4 | 60.08 |
| GSMUA_Achr5P01680_001 | Banana | cytosol | 57.52 | 55.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.05 | 53.85 |
| TraesCS2A01G180800.1 | Wheat | nucleus, plastid | 53.01 | 53.82 |
| HORVU2Hr1G034110.1 | Barley | plastid | 59.4 | 50.8 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P24620_001 | EnsemblPlants:GSMUA_Achr6T24620_001 | EnsemblPlantsGene:GSMUA_Achr6G24620_001 | Gene3D:1.20.5.110 | InterPro:IPR000727 | InterPro:T_SNARE_dom |
| ncoils:Coil | PANTHER:PTHR19305 | PANTHER:PTHR19305:SF7 | PFscan:PS50192 | SEG:seg | SMART:SM00397 |
| SUPFAM:SSF58038 | UniParc:UPI000296B3A1 | UniProt:M0T9V8 | MapMan:22.7.3.1 | : | : |
Description
SNAP25 homologous protein SNAP33 [Source:GMGC_GENE;Acc:GSMUA_Achr6G24620_001]
Coordinates
chr6:+:25430663..25433350
Molecular Weight (calculated)
29292.1 Da
IEP (calculated)
6.529
GRAVY (calculated)
-0.969
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVSRGAKQR SSDPALSKPN PFDSDSESEM NPKRGMSSSG TATASAAARN RYKNDFRDEG GLENQSVQEL ESYAAYKAEE TTQKVNDCLK IAEVIREDAS
101: NTLVMLHQQG EQITRTHETA VSIDQDLSRG EKLLGSLGGF FSRPWKPNKA HQIKGPAPTT DDSLSKKVSH MEQREKLGLS SKPQSNPRNY SEPTSAMDKV
201: QMEKAKQDDT LSDLSDVLGQ LKGMAVDMGS EMDRQNKALD ALHDDVDELN SRVKGANQRA RHLLGK
101: NTLVMLHQQG EQITRTHETA VSIDQDLSRG EKLLGSLGGF FSRPWKPNKA HQIKGPAPTT DDSLSKKVSH MEQREKLGLS SKPQSNPRNY SEPTSAMDKV
201: QMEKAKQDDT LSDLSDVLGQ LKGMAVDMGS EMDRQNKALD ALHDDVDELN SRVKGANQRA RHLLGK
001: MFGLRKSPAN LPKHNSVDLK SSKPNPFDSD DESDNKHTLN PSKRTTSEPS LADMTNPFGG ERVQKGDSSS SKQSLFSNSK YQYKNNFRDS GGIENQSVQE
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK
Arabidopsis Description
SNAP33SNP33 [Source:UniProtKB/TrEMBL;Acc:A0A178UGR9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.