CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016686_P003	Maize	nucleus	90.42	90.08
Os02t0529500-01	Rice	plasma membrane	73.95	74.52
TraesCS3D01G384300.1	Wheat	cytosol	72.03	73.44
TraesCS3A01G391300.1	Wheat	cytosol	71.65	73.05
TraesCS3B01G423500.1	Wheat	cytosol	71.65	73.05
HORVU3Hr1G088590.6	Barley	cytosol	72.41	71.86
GSMUA_Achr6P24620_001	Banana	nucleus	64.75	63.53
KXG34983	Sorghum	nucleus, plastid	53.64	48.28
EER95289	Sorghum	cytosol	44.44	47.35

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.3.1	EntrezGene:8058636	UniProt:C5XTD7	ncoils:Coil	EnsemblPlants:EES05172
ProteinID:EES05172	ProteinID:EES05172.1	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0016020
InterPro:IPR000727	PFAM:PF12352	PFscan:PS50192	PANTHER:PTHR19305	PANTHER:PTHR19305:SF7	SMART:SM00397
EnsemblPlantsGene:SORBI_3004G163900	SUPFAM:SSF58038	InterPro:T_SNARE_dom	UniParc:UPI0001A856E9	RefSeq:XP_002452196.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:51334930..51336965

Molecular Weight (calculated)

28668.5 Da

IEP (calculated)

8.872

GRAVY (calculated)

-1.036

Length

261 amino acids

Sequence
(BLAST)

001: MPLGGKPAAS SKPNPFDSDS DSESNNKPAA KKSGAYQAPA DAKKRYKDGF RDAGGLENQS VEELQHYAAY KAEETTDALE GCLRIAEDIK KDASDTLVTL
101: HKQGEQISRT HEKAVEIDQD LSKSESLLGS LGGFFSKPWK PKKTKQIKGP AHVSRDDSFK KKASRMEQRD KLGLSPRGKR DPRHYAEATD AMDKVQIEKK
201: KQDDALDDLS GVLGQLKGMA VDMGSELDRQ NEALDNLQGD VDELNSRVKG ANQRARKLVA K

Best Arabidopsis Sequence Match ( AT5G61210.1 )
(BLAST)

001: MFGLRKSPAN LPKHNSVDLK SSKPNPFDSD DESDNKHTLN PSKRTTSEPS LADMTNPFGG ERVQKGDSSS SKQSLFSNSK YQYKNNFRDS GGIENQSVQE
101: LEGYAVYKAE ETTKSVQGCL KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK TRPINGPVVT RDDSPTRRVN
201: HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK

Arabidopsis Description

SNAP33SNP33 [Source:UniProtKB/TrEMBL;Acc:A0A178UGR9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.